Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb6Q91XZ4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb6Q91XZ4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhb6Q91XZ4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb6Q91XZ4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb6Q91XZ4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb6Q91XZ4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb6Q91XZ4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb6Q91XZ4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb6Q91XZ4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb6Q91XZ4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb6Q91XZ4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb6Q91XZ4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb6Q91XZ4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb6Q91XZ4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb6Q91XZ4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.96■■□□□ 1.11
Pcdhb6Q91XZ4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.96■■□□□ 1.11
Pcdhb6Q91XZ4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb6Q91XZ4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb6Q91XZ4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb6Q91XZ4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb6Q91XZ4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.95■■□□□ 1.1
Pcdhb6Q91XZ4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb6Q91XZ4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb6Q91XZ4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdhb6Q91XZ4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb6Q91XZ4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb6Q91XZ4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Pcdhb6Q91XZ4 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.94■■□□□ 1.1
Pcdhb6Q91XZ4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb6Q91XZ4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Pcdhb6Q91XZ4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb6Q91XZ4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb6Q91XZ4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb6Q91XZ4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhb6Q91XZ4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb6Q91XZ4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb6Q91XZ4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb6Q91XZ4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb6Q91XZ4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb6Q91XZ4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb6Q91XZ4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb6Q91XZ4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb6Q91XZ4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb6Q91XZ4 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.92■■□□□ 1.1
Pcdhb6Q91XZ4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb6Q91XZ4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb6Q91XZ4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb6Q91XZ4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb6Q91XZ4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.91■■□□□ 1.1
Pcdhb6Q91XZ4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb6Q91XZ4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdhb6Q91XZ4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.9■■□□□ 1.1
Pcdhb6Q91XZ4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb6Q91XZ4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.89■■□□□ 1.09
Pcdhb6Q91XZ4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb6Q91XZ4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Pcdhb6Q91XZ4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb6Q91XZ4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhb6Q91XZ4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb6Q91XZ4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb6Q91XZ4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb6Q91XZ4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Pcdhb6Q91XZ4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhb6Q91XZ4 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms