Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhga11Q91XY8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhga11Q91XY8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga11Q91XY8 Gm7332-201ENSMUST00000118351 454 ntBASIC20.48■□□□□ 0.87
Pcdhga11Q91XY8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga11Q91XY8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga11Q91XY8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga11Q91XY8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga11Q91XY8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Pcdhga11Q91XY8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhga11Q91XY8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga11Q91XY8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga11Q91XY8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Pcdhga11Q91XY8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga11Q91XY8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhga11Q91XY8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga11Q91XY8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga11Q91XY8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhga11Q91XY8 Gm14523-201ENSMUST00000117260 558 ntBASIC20.45■□□□□ 0.86
Pcdhga11Q91XY8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga11Q91XY8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga11Q91XY8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga11Q91XY8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga11Q91XY8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhga11Q91XY8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga11Q91XY8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga11Q91XY8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga11Q91XY8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga11Q91XY8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhga11Q91XY8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
Pcdhga11Q91XY8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga11Q91XY8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhga11Q91XY8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga11Q91XY8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdhga11Q91XY8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga11Q91XY8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga11Q91XY8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhga11Q91XY8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga11Q91XY8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdhga11Q91XY8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdhga11Q91XY8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga11Q91XY8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga11Q91XY8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga11Q91XY8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga11Q91XY8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhga11Q91XY8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga11Q91XY8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhga11Q91XY8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga11Q91XY8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga11Q91XY8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga11Q91XY8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhga11Q91XY8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdhga11Q91XY8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga11Q91XY8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga11Q91XY8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhga11Q91XY8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms