Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgb4Q91XX6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Pcdhgb4Q91XX6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.55■■□□□ 1.2
Pcdhgb4Q91XX6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Pcdhgb4Q91XX6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb4Q91XX6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
Pcdhgb4Q91XX6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb4Q91XX6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Pcdhgb4Q91XX6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.54■■□□□ 1.2
Pcdhgb4Q91XX6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgb4Q91XX6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgb4Q91XX6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb4Q91XX6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.52■■□□□ 1.2
Pcdhgb4Q91XX6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb4Q91XX6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.52■■□□□ 1.2
Pcdhgb4Q91XX6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb4Q91XX6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb4Q91XX6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhgb4Q91XX6 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.52■■□□□ 1.2
Pcdhgb4Q91XX6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb4Q91XX6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.51■■□□□ 1.19
Pcdhgb4Q91XX6 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.51■■□□□ 1.19
Pcdhgb4Q91XX6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgb4Q91XX6 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.5■■□□□ 1.19
Pcdhgb4Q91XX6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb4Q91XX6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Pcdhgb4Q91XX6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb4Q91XX6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb4Q91XX6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.5■■□□□ 1.19
Pcdhgb4Q91XX6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgb4Q91XX6 Gm10420-201ENSMUST00000121713 882 ntBASIC22.49■■□□□ 1.19
Pcdhgb4Q91XX6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb4Q91XX6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Pcdhgb4Q91XX6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb4Q91XX6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Pcdhgb4Q91XX6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgb4Q91XX6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb4Q91XX6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.48■■□□□ 1.19
Pcdhgb4Q91XX6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Pcdhgb4Q91XX6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb4Q91XX6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb4Q91XX6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
Pcdhgb4Q91XX6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb4Q91XX6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhgb4Q91XX6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.47■■□□□ 1.19
Pcdhgb4Q91XX6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb4Q91XX6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb4Q91XX6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb4Q91XX6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb4Q91XX6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.47■■□□□ 1.19
Pcdhgb4Q91XX6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Pcdhgb4Q91XX6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgb4Q91XX6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb4Q91XX6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb4Q91XX6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.46■■□□□ 1.19
Pcdhgb4Q91XX6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb4Q91XX6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb4Q91XX6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhgb4Q91XX6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdhgb4Q91XX6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgb4Q91XX6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb4Q91XX6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb4Q91XX6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb4Q91XX6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.44■■□□□ 1.18
Pcdhgb4Q91XX6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb4Q91XX6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb4Q91XX6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb4Q91XX6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgb4Q91XX6 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.43■■□□□ 1.18
Pcdhgb4Q91XX6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb4Q91XX6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb4Q91XX6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.43■■□□□ 1.18
Pcdhgb4Q91XX6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
Pcdhgb4Q91XX6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgb4Q91XX6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb4Q91XX6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb4Q91XX6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb4Q91XX6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb4Q91XX6 Cap2-205ENSMUST00000225824 1634 ntBASIC22.42■■□□□ 1.18
Pcdhgb4Q91XX6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgb4Q91XX6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgb4Q91XX6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms