Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb5Q91XX5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb5Q91XX5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb5Q91XX5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb5Q91XX5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb5Q91XX5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb5Q91XX5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb5Q91XX5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb5Q91XX5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb5Q91XX5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb5Q91XX5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhgb5Q91XX5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb5Q91XX5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb5Q91XX5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.2■□□□□ 0.98
Pcdhgb5Q91XX5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhgb5Q91XX5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb5Q91XX5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb5Q91XX5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb5Q91XX5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcdhgb5Q91XX5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb5Q91XX5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb5Q91XX5 Gm12922-201ENSMUST00000120626 809 ntBASIC21.18■□□□□ 0.98
Pcdhgb5Q91XX5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb5Q91XX5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb5Q91XX5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhgb5Q91XX5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb5Q91XX5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Pcdhgb5Q91XX5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhgb5Q91XX5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb5Q91XX5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb5Q91XX5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb5Q91XX5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb5Q91XX5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb5Q91XX5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb5Q91XX5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgb5Q91XX5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgb5Q91XX5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgb5Q91XX5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.14■□□□□ 0.98
Pcdhgb5Q91XX5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhgb5Q91XX5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb5Q91XX5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhgb5Q91XX5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.14■□□□□ 0.97
Pcdhgb5Q91XX5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb5Q91XX5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb5Q91XX5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb5Q91XX5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb5Q91XX5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb5Q91XX5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb5Q91XX5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb5Q91XX5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb5Q91XX5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Pcdhgb5Q91XX5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb5Q91XX5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb5Q91XX5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhgb5Q91XX5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhgb5Q91XX5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.1■□□□□ 0.97
Pcdhgb5Q91XX5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhgb5Q91XX5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgb5Q91XX5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcdhgb5Q91XX5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb5Q91XX5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb5Q91XX5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgb5Q91XX5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdhgb5Q91XX5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Pcdhgb5Q91XX5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgb5Q91XX5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Pcdhgb5Q91XX5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.08■□□□□ 0.97
Pcdhgb5Q91XX5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgb5Q91XX5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Pcdhgb5Q91XX5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb5Q91XX5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb5Q91XX5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms