Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.3■■□□□ 1.48
Pcdhgc5Q91XW9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhgc5Q91XW9 Serp2-204ENSMUST00000228055 705 ntBASIC24.3■■□□□ 1.48
Pcdhgc5Q91XW9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhgc5Q91XW9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhgc5Q91XW9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.29■■□□□ 1.48
Pcdhgc5Q91XW9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Pcdhgc5Q91XW9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.29■■□□□ 1.48
Pcdhgc5Q91XW9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhgc5Q91XW9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhgc5Q91XW9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.28■■□□□ 1.48
Pcdhgc5Q91XW9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.28■■□□□ 1.48
Pcdhgc5Q91XW9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Pcdhgc5Q91XW9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgc5Q91XW9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgc5Q91XW9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgc5Q91XW9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgc5Q91XW9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhgc5Q91XW9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Pcdhgc5Q91XW9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhgc5Q91XW9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhgc5Q91XW9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.27■■□□□ 1.48
Pcdhgc5Q91XW9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhgc5Q91XW9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC24.27■■□□□ 1.48
Pcdhgc5Q91XW9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhgc5Q91XW9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Pcdhgc5Q91XW9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgc5Q91XW9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgc5Q91XW9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC24.26■■□□□ 1.47
Pcdhgc5Q91XW9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgc5Q91XW9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgc5Q91XW9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgc5Q91XW9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgc5Q91XW9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgc5Q91XW9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgc5Q91XW9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgc5Q91XW9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgc5Q91XW9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgc5Q91XW9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhgc5Q91XW9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhgc5Q91XW9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
Pcdhgc5Q91XW9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhgc5Q91XW9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.24■■□□□ 1.47
Pcdhgc5Q91XW9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhgc5Q91XW9 Gm9847-201ENSMUST00000052528 599 ntBASIC24.24■■□□□ 1.47
Pcdhgc5Q91XW9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhgc5Q91XW9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Pcdhgc5Q91XW9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.23■■□□□ 1.47
Pcdhgc5Q91XW9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.23■■□□□ 1.47
Pcdhgc5Q91XW9 Gm22238-201ENSMUST00000175222 88 ntBASIC24.23■■□□□ 1.47
Pcdhgc5Q91XW9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.23■■□□□ 1.47
Pcdhgc5Q91XW9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Pcdhgc5Q91XW9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Pcdhgc5Q91XW9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 Notumos-201ENSMUST00000151998 2659 ntBASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc5Q91XW9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgc5Q91XW9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgc5Q91XW9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgc5Q91XW9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgc5Q91XW9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgc5Q91XW9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Pcdhgc5Q91XW9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhgc5Q91XW9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.2■■□□□ 1.46
Pcdhgc5Q91XW9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhgc5Q91XW9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhgc5Q91XW9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhgc5Q91XW9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhgc5Q91XW9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhgc5Q91XW9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhgc5Q91XW9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.19■■□□□ 1.46
Pcdhgc5Q91XW9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhgc5Q91XW9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
Pcdhgc5Q91XW9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.19■■□□□ 1.46
Pcdhgc5Q91XW9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhgc5Q91XW9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhgc5Q91XW9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhgc5Q91XW9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24.18■■□□□ 1.46
Pcdhgc5Q91XW9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
Pcdhgc5Q91XW9 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.17■■□□□ 1.46
Pcdhgc5Q91XW9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhgc5Q91XW9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.17■■□□□ 1.46
Pcdhgc5Q91XW9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhgc5Q91XW9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgc5Q91XW9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgc5Q91XW9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.16■■□□□ 1.46
Pcdhgc5Q91XW9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgc5Q91XW9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgc5Q91XW9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgc5Q91XW9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Pcdhgc5Q91XW9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgc5Q91XW9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhgc5Q91XW9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms