Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vsx1Q91V10 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vsx1Q91V10 Gm18284-201ENSMUST00000172604 624 ntBASIC21.13■□□□□ 0.97
Vsx1Q91V10 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.13■□□□□ 0.97
Vsx1Q91V10 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vsx1Q91V10 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.13■□□□□ 0.97
Vsx1Q91V10 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vsx1Q91V10 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vsx1Q91V10 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.12■□□□□ 0.97
Vsx1Q91V10 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
Vsx1Q91V10 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vsx1Q91V10 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vsx1Q91V10 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vsx1Q91V10 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Vsx1Q91V10 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.11■□□□□ 0.97
Vsx1Q91V10 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vsx1Q91V10 Gm29257-201ENSMUST00000186115 639 ntBASIC21.11■□□□□ 0.97
Vsx1Q91V10 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vsx1Q91V10 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vsx1Q91V10 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Vsx1Q91V10 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vsx1Q91V10 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vsx1Q91V10 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vsx1Q91V10 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.1■□□□□ 0.97
Vsx1Q91V10 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vsx1Q91V10 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vsx1Q91V10 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vsx1Q91V10 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vsx1Q91V10 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Vsx1Q91V10 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.09■□□□□ 0.97
Vsx1Q91V10 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.09■□□□□ 0.97
Vsx1Q91V10 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.09■□□□□ 0.97
Vsx1Q91V10 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vsx1Q91V10 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vsx1Q91V10 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vsx1Q91V10 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vsx1Q91V10 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vsx1Q91V10 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.08■□□□□ 0.97
Vsx1Q91V10 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vsx1Q91V10 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vsx1Q91V10 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vsx1Q91V10 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.07■□□□□ 0.96
Vsx1Q91V10 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vsx1Q91V10 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vsx1Q91V10 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.07■□□□□ 0.96
Vsx1Q91V10 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.07■□□□□ 0.96
Vsx1Q91V10 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vsx1Q91V10 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vsx1Q91V10 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vsx1Q91V10 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vsx1Q91V10 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vsx1Q91V10 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vsx1Q91V10 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.06■□□□□ 0.96
Vsx1Q91V10 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Vsx1Q91V10 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Vsx1Q91V10 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.06■□□□□ 0.96
Vsx1Q91V10 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vsx1Q91V10 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
Vsx1Q91V10 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Vsx1Q91V10 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Vsx1Q91V10 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.05■□□□□ 0.96
Vsx1Q91V10 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Vsx1Q91V10 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Vsx1Q91V10 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vsx1Q91V10 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.03■□□□□ 0.96
Vsx1Q91V10 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Vsx1Q91V10 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.02■□□□□ 0.96
Vsx1Q91V10 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vsx1Q91V10 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vsx1Q91V10 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.01■□□□□ 0.95
Vsx1Q91V10 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vsx1Q91V10 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vsx1Q91V10 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms