Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tram1Q91V04 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tram1Q91V04 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Tram1Q91V04 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tram1Q91V04 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tram1Q91V04 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Tram1Q91V04 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.26■□□□□ 0.51
Tram1Q91V04 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tram1Q91V04 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Tram1Q91V04 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tram1Q91V04 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tram1Q91V04 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tram1Q91V04 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tram1Q91V04 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.25■□□□□ 0.51
Tram1Q91V04 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tram1Q91V04 Gm4799-201ENSMUST00000095396 657 ntBASIC18.25■□□□□ 0.51
Tram1Q91V04 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tram1Q91V04 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tram1Q91V04 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tram1Q91V04 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tram1Q91V04 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tram1Q91V04 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.24■□□□□ 0.51
Tram1Q91V04 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tram1Q91V04 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Tram1Q91V04 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.24■□□□□ 0.51
Tram1Q91V04 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tram1Q91V04 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tram1Q91V04 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tram1Q91V04 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tram1Q91V04 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tram1Q91V04 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Tram1Q91V04 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tram1Q91V04 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tram1Q91V04 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tram1Q91V04 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Tram1Q91V04 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tram1Q91V04 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Tram1Q91V04 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Tram1Q91V04 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tram1Q91V04 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Tram1Q91V04 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tram1Q91V04 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.22■□□□□ 0.51
Tram1Q91V04 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.22■□□□□ 0.51
Tram1Q91V04 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tram1Q91V04 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.22■□□□□ 0.51
Tram1Q91V04 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tram1Q91V04 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.22■□□□□ 0.51
Tram1Q91V04 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tram1Q91V04 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tram1Q91V04 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tram1Q91V04 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tram1Q91V04 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tram1Q91V04 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tram1Q91V04 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tram1Q91V04 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tram1Q91V04 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.21■□□□□ 0.51
Tram1Q91V04 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tram1Q91V04 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tram1Q91V04 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tram1Q91V04 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tram1Q91V04 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.2■□□□□ 0.5
Tram1Q91V04 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.2■□□□□ 0.5
Tram1Q91V04 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tram1Q91V04 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.2■□□□□ 0.5
Tram1Q91V04 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tram1Q91V04 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tram1Q91V04 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tram1Q91V04 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tram1Q91V04 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tram1Q91V04 Terc-201ENSMUST00000082862 423 ntBASIC18.19■□□□□ 0.5
Tram1Q91V04 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tram1Q91V04 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tram1Q91V04 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tram1Q91V04 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tram1Q91V04 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tram1Q91V04 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Tram1Q91V04 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tram1Q91V04 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tram1Q91V04 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tram1Q91V04 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tram1Q91V04 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tram1Q91V04 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tram1Q91V04 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tram1Q91V04 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tram1Q91V04 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tram1Q91V04 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tram1Q91V04 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Tram1Q91V04 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Tram1Q91V04 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tram1Q91V04 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tram1Q91V04 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.16■□□□□ 0.5
Tram1Q91V04 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.16■□□□□ 0.5
Tram1Q91V04 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Tram1Q91V04 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tram1Q91V04 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tram1Q91V04 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tram1Q91V04 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tram1Q91V04 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tram1Q91V04 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tram1Q91V04 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms