Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Odf4Q8VI88 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Odf4Q8VI88 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.84■□□□□ 0.61
Odf4Q8VI88 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.84■□□□□ 0.61
Odf4Q8VI88 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Odf4Q8VI88 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.84■□□□□ 0.61
Odf4Q8VI88 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Odf4Q8VI88 Iqck-206ENSMUST00000208658 2891 ntBASIC18.84■□□□□ 0.61
Odf4Q8VI88 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Odf4Q8VI88 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Odf4Q8VI88 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Odf4Q8VI88 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Odf4Q8VI88 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Odf4Q8VI88 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Odf4Q8VI88 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Odf4Q8VI88 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Odf4Q8VI88 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Odf4Q8VI88 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf4Q8VI88 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf4Q8VI88 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf4Q8VI88 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf4Q8VI88 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf4Q8VI88 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Odf4Q8VI88 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Odf4Q8VI88 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf4Q8VI88 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf4Q8VI88 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf4Q8VI88 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Odf4Q8VI88 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Odf4Q8VI88 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Odf4Q8VI88 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Odf4Q8VI88 Gm15546-201ENSMUST00000122095 826 ntBASIC18.81■□□□□ 0.6
Odf4Q8VI88 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.81■□□□□ 0.6
Odf4Q8VI88 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Odf4Q8VI88 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Odf4Q8VI88 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Odf4Q8VI88 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
Odf4Q8VI88 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Odf4Q8VI88 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Odf4Q8VI88 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Odf4Q8VI88 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Odf4Q8VI88 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Odf4Q8VI88 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Odf4Q8VI88 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Odf4Q8VI88 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.79■□□□□ 0.6
Odf4Q8VI88 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Odf4Q8VI88 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Odf4Q8VI88 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.79■□□□□ 0.6
Odf4Q8VI88 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Odf4Q8VI88 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Odf4Q8VI88 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Odf4Q8VI88 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Odf4Q8VI88 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Odf4Q8VI88 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Odf4Q8VI88 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Odf4Q8VI88 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Odf4Q8VI88 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Odf4Q8VI88 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.78■□□□□ 0.6
Odf4Q8VI88 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.77■□□□□ 0.6
Odf4Q8VI88 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Odf4Q8VI88 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Odf4Q8VI88 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.76■□□□□ 0.59
Odf4Q8VI88 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Odf4Q8VI88 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Odf4Q8VI88 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Odf4Q8VI88 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Odf4Q8VI88 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Odf4Q8VI88 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.75■□□□□ 0.59
Odf4Q8VI88 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Odf4Q8VI88 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Odf4Q8VI88 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Odf4Q8VI88 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Odf4Q8VI88 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Odf4Q8VI88 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Odf4Q8VI88 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.74■□□□□ 0.59
Odf4Q8VI88 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Odf4Q8VI88 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.74■□□□□ 0.59
Odf4Q8VI88 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Odf4Q8VI88 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Odf4Q8VI88 Gm15820-201ENSMUST00000201566 728 ntBASIC18.73■□□□□ 0.59
Odf4Q8VI88 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Odf4Q8VI88 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Odf4Q8VI88 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Odf4Q8VI88 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Odf4Q8VI88 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Odf4Q8VI88 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Odf4Q8VI88 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Odf4Q8VI88 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Odf4Q8VI88 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.72■□□□□ 0.59
Odf4Q8VI88 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Odf4Q8VI88 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms