Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Chrna3Q8R4G9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna3Q8R4G9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna3Q8R4G9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna3Q8R4G9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna3Q8R4G9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna3Q8R4G9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna3Q8R4G9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna3Q8R4G9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna3Q8R4G9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna3Q8R4G9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chrna3Q8R4G9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna3Q8R4G9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chrna3Q8R4G9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chrna3Q8R4G9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.89■□□□□ 0.93
Chrna3Q8R4G9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna3Q8R4G9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Chrna3Q8R4G9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Chrna3Q8R4G9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna3Q8R4G9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna3Q8R4G9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.88■□□□□ 0.93
Chrna3Q8R4G9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Chrna3Q8R4G9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna3Q8R4G9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna3Q8R4G9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna3Q8R4G9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna3Q8R4G9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna3Q8R4G9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Chrna3Q8R4G9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna3Q8R4G9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna3Q8R4G9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chrna3Q8R4G9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna3Q8R4G9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna3Q8R4G9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna3Q8R4G9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna3Q8R4G9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chrna3Q8R4G9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna3Q8R4G9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna3Q8R4G9 Rps24-207ENSMUST00000224568 714 ntBASIC20.86■□□□□ 0.93
Chrna3Q8R4G9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna3Q8R4G9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chrna3Q8R4G9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna3Q8R4G9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna3Q8R4G9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Chrna3Q8R4G9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna3Q8R4G9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.85■□□□□ 0.93
Chrna3Q8R4G9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.85■□□□□ 0.93
Chrna3Q8R4G9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna3Q8R4G9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna3Q8R4G9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna3Q8R4G9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.84■□□□□ 0.93
Chrna3Q8R4G9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna3Q8R4G9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.84■□□□□ 0.93
Chrna3Q8R4G9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna3Q8R4G9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chrna3Q8R4G9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Gm45102-201ENSMUST00000207427 857 ntBASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Gm9959-201ENSMUST00000068277 390 ntBASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Chrna3Q8R4G9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.81■□□□□ 0.92
Chrna3Q8R4G9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna3Q8R4G9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna3Q8R4G9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.81■□□□□ 0.92
Chrna3Q8R4G9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.81■□□□□ 0.92
Chrna3Q8R4G9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna3Q8R4G9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna3Q8R4G9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna3Q8R4G9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna3Q8R4G9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna3Q8R4G9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna3Q8R4G9 Gm14117-201ENSMUST00000122417 843 ntBASIC20.79■□□□□ 0.92
Chrna3Q8R4G9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.79■□□□□ 0.92
Chrna3Q8R4G9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna3Q8R4G9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna3Q8R4G9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 353.9 ms