Protein–RNA interactions for Protein: Q8R2C8

Vmn1r18, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r18Q8R2C8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.65■■□□□ 1.06
Vmn1r18Q8R2C8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r18Q8R2C8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.64■■□□□ 1.06
Vmn1r18Q8R2C8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Vmn1r18Q8R2C8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r18Q8R2C8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vmn1r18Q8R2C8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Gm14117-201ENSMUST00000122417 843 ntBASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r18Q8R2C8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.62■■□□□ 1.05
Vmn1r18Q8R2C8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r18Q8R2C8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r18Q8R2C8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Vmn1r18Q8R2C8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.61■■□□□ 1.05
Vmn1r18Q8R2C8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r18Q8R2C8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.61■■□□□ 1.05
Vmn1r18Q8R2C8 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.61■■□□□ 1.05
Vmn1r18Q8R2C8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r18Q8R2C8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r18Q8R2C8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Vmn1r18Q8R2C8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.6■■□□□ 1.05
Vmn1r18Q8R2C8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r18Q8R2C8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r18Q8R2C8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r18Q8R2C8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r18Q8R2C8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r18Q8R2C8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r18Q8R2C8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r18Q8R2C8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r18Q8R2C8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r18Q8R2C8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r18Q8R2C8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r18Q8R2C8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r18Q8R2C8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.58■■□□□ 1.05
Vmn1r18Q8R2C8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vmn1r18Q8R2C8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vmn1r18Q8R2C8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vmn1r18Q8R2C8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vmn1r18Q8R2C8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r18Q8R2C8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r18Q8R2C8 Etf1-202ENSMUST00000180351 108 ntBASIC21.57■■□□□ 1.04
Vmn1r18Q8R2C8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r18Q8R2C8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.57■■□□□ 1.04
Vmn1r18Q8R2C8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r18Q8R2C8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r18Q8R2C8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.57■■□□□ 1.04
Vmn1r18Q8R2C8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Vmn1r18Q8R2C8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r18Q8R2C8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r18Q8R2C8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r18Q8R2C8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.56■■□□□ 1.04
Vmn1r18Q8R2C8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.55■■□□□ 1.04
Vmn1r18Q8R2C8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r18Q8R2C8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Vmn1r18Q8R2C8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r18Q8R2C8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vmn1r18Q8R2C8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r18Q8R2C8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r18Q8R2C8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.54■■□□□ 1.04
Vmn1r18Q8R2C8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.54■■□□□ 1.04
Vmn1r18Q8R2C8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r18Q8R2C8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r18Q8R2C8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r18Q8R2C8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r18Q8R2C8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.53■■□□□ 1.04
Vmn1r18Q8R2C8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r18Q8R2C8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r18Q8R2C8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r18Q8R2C8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.52■■□□□ 1.04
Vmn1r18Q8R2C8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r18Q8R2C8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r18Q8R2C8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.52■■□□□ 1.04
Vmn1r18Q8R2C8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.52■■□□□ 1.04
Vmn1r18Q8R2C8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r18Q8R2C8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vmn1r18Q8R2C8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Vmn1r18Q8R2C8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Vmn1r18Q8R2C8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r18Q8R2C8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r18Q8R2C8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Gm10399-202ENSMUST00000202768 748 ntBASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Gm40881-201ENSMUST00000223397 166 ntBASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r18Q8R2C8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.49■■□□□ 1.03
Vmn1r18Q8R2C8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms