Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Chmp7Q8R1T1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC27.53■■■□□ 2
Chmp7Q8R1T1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Chmp7Q8R1T1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Chmp7Q8R1T1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
Chmp7Q8R1T1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC27.53■■■□□ 2
Chmp7Q8R1T1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Chmp7Q8R1T1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.52■■■□□ 2
Chmp7Q8R1T1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC27.52■■■□□ 2
Chmp7Q8R1T1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Chmp7Q8R1T1 AC140930.3-201ENSMUST00000222935 274 ntBASIC27.52■■■□□ 2
Chmp7Q8R1T1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Chmp7Q8R1T1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Chmp7Q8R1T1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Chmp7Q8R1T1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC27.51■■□□□ 1.99
Chmp7Q8R1T1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC27.51■■□□□ 1.99
Chmp7Q8R1T1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Chmp7Q8R1T1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Chmp7Q8R1T1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC27.5■■□□□ 1.99
Chmp7Q8R1T1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Chmp7Q8R1T1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC27.5■■□□□ 1.99
Chmp7Q8R1T1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Chmp7Q8R1T1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Chmp7Q8R1T1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Chmp7Q8R1T1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Chmp7Q8R1T1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Chmp7Q8R1T1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC27.49■■□□□ 1.99
Chmp7Q8R1T1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Chmp7Q8R1T1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Chmp7Q8R1T1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Chmp7Q8R1T1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Chmp7Q8R1T1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Chmp7Q8R1T1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC27.47■■□□□ 1.99
Chmp7Q8R1T1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Chmp7Q8R1T1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC27.47■■□□□ 1.99
Chmp7Q8R1T1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC27.47■■□□□ 1.99
Chmp7Q8R1T1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Chmp7Q8R1T1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Chmp7Q8R1T1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC27.46■■□□□ 1.99
Chmp7Q8R1T1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC27.46■■□□□ 1.99
Chmp7Q8R1T1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC27.46■■□□□ 1.99
Chmp7Q8R1T1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
Chmp7Q8R1T1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Chmp7Q8R1T1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Chmp7Q8R1T1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Chmp7Q8R1T1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Chmp7Q8R1T1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC27.45■■□□□ 1.98
Chmp7Q8R1T1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Chmp7Q8R1T1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Chmp7Q8R1T1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Chmp7Q8R1T1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Chmp7Q8R1T1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC27.44■■□□□ 1.98
Chmp7Q8R1T1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC27.44■■□□□ 1.98
Chmp7Q8R1T1 Appbp2os-202ENSMUST00000206972 447 ntBASIC27.44■■□□□ 1.98
Chmp7Q8R1T1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Chmp7Q8R1T1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Chmp7Q8R1T1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC27.43■■□□□ 1.98
Chmp7Q8R1T1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Chmp7Q8R1T1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Chmp7Q8R1T1 Golgb1-201ENSMUST00000023534 498 ntBASIC27.42■■□□□ 1.98
Chmp7Q8R1T1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Chmp7Q8R1T1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Chmp7Q8R1T1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Chmp7Q8R1T1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC27.41■■□□□ 1.98
Chmp7Q8R1T1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Chmp7Q8R1T1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Chmp7Q8R1T1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Chmp7Q8R1T1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Chmp7Q8R1T1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC27.4■■□□□ 1.98
Chmp7Q8R1T1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Chmp7Q8R1T1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Chmp7Q8R1T1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC27.4■■□□□ 1.98
Chmp7Q8R1T1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Chmp7Q8R1T1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Chmp7Q8R1T1 Gm12821-201ENSMUST00000120022 600 ntBASIC27.39■■□□□ 1.98
Chmp7Q8R1T1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Chmp7Q8R1T1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Chmp7Q8R1T1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Chmp7Q8R1T1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Chmp7Q8R1T1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Chmp7Q8R1T1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Chmp7Q8R1T1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC27.38■■□□□ 1.97
Chmp7Q8R1T1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Chmp7Q8R1T1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Chmp7Q8R1T1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Chmp7Q8R1T1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Chmp7Q8R1T1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Chmp7Q8R1T1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Chmp7Q8R1T1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Chmp7Q8R1T1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Chmp7Q8R1T1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Chmp7Q8R1T1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC27.36■■□□□ 1.97
Chmp7Q8R1T1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Chmp7Q8R1T1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Chmp7Q8R1T1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Chmp7Q8R1T1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Chmp7Q8R1T1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Chmp7Q8R1T1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Chmp7Q8R1T1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Chmp7Q8R1T1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms