Protein–RNA interactions for Protein: Q8R1S9

Slc38a4, Sodium-coupled neutral amino acid transporter 4, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc38a4Q8R1S9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc38a4Q8R1S9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc38a4Q8R1S9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Slc38a4Q8R1S9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc38a4Q8R1S9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc38a4Q8R1S9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc38a4Q8R1S9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc38a4Q8R1S9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc38a4Q8R1S9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc38a4Q8R1S9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc38a4Q8R1S9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc38a4Q8R1S9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.13■□□□□ 0.81
Slc38a4Q8R1S9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc38a4Q8R1S9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc38a4Q8R1S9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc38a4Q8R1S9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc38a4Q8R1S9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.13■□□□□ 0.81
Slc38a4Q8R1S9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc38a4Q8R1S9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc38a4Q8R1S9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc38a4Q8R1S9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc38a4Q8R1S9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc38a4Q8R1S9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc38a4Q8R1S9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc38a4Q8R1S9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.11■□□□□ 0.81
Slc38a4Q8R1S9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc38a4Q8R1S9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc38a4Q8R1S9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc38a4Q8R1S9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc38a4Q8R1S9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.1■□□□□ 0.81
Slc38a4Q8R1S9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc38a4Q8R1S9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.1■□□□□ 0.81
Slc38a4Q8R1S9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc38a4Q8R1S9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc38a4Q8R1S9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc38a4Q8R1S9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc38a4Q8R1S9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc38a4Q8R1S9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc38a4Q8R1S9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc38a4Q8R1S9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc38a4Q8R1S9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Slc38a4Q8R1S9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc38a4Q8R1S9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.09■□□□□ 0.81
Slc38a4Q8R1S9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc38a4Q8R1S9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc38a4Q8R1S9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc38a4Q8R1S9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Slc38a4Q8R1S9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc38a4Q8R1S9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Slc38a4Q8R1S9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc38a4Q8R1S9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.06■□□□□ 0.8
Slc38a4Q8R1S9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc38a4Q8R1S9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc38a4Q8R1S9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc38a4Q8R1S9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc38a4Q8R1S9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc38a4Q8R1S9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Slc38a4Q8R1S9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Slc38a4Q8R1S9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Slc38a4Q8R1S9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.04■□□□□ 0.8
Slc38a4Q8R1S9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Slc38a4Q8R1S9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc38a4Q8R1S9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc38a4Q8R1S9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Slc38a4Q8R1S9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Slc38a4Q8R1S9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc38a4Q8R1S9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms