Protein–RNA interactions for Protein: Q8K406

Lgi3, Leucine-rich repeat LGI family member 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi3Q8K406 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lgi3Q8K406 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lgi3Q8K406 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lgi3Q8K406 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.22■□□□□ 0.51
Lgi3Q8K406 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lgi3Q8K406 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lgi3Q8K406 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.22■□□□□ 0.51
Lgi3Q8K406 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lgi3Q8K406 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lgi3Q8K406 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lgi3Q8K406 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lgi3Q8K406 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lgi3Q8K406 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lgi3Q8K406 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.21■□□□□ 0.51
Lgi3Q8K406 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lgi3Q8K406 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.21■□□□□ 0.51
Lgi3Q8K406 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lgi3Q8K406 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Lgi3Q8K406 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lgi3Q8K406 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Lgi3Q8K406 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lgi3Q8K406 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lgi3Q8K406 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lgi3Q8K406 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lgi3Q8K406 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lgi3Q8K406 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.19■□□□□ 0.5
Lgi3Q8K406 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Lgi3Q8K406 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lgi3Q8K406 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lgi3Q8K406 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lgi3Q8K406 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lgi3Q8K406 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgi3Q8K406 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgi3Q8K406 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lgi3Q8K406 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgi3Q8K406 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lgi3Q8K406 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgi3Q8K406 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.18■□□□□ 0.5
Lgi3Q8K406 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.18■□□□□ 0.5
Lgi3Q8K406 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lgi3Q8K406 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Lgi3Q8K406 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lgi3Q8K406 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgi3Q8K406 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgi3Q8K406 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgi3Q8K406 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgi3Q8K406 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgi3Q8K406 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lgi3Q8K406 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lgi3Q8K406 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.15■□□□□ 0.5
Lgi3Q8K406 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lgi3Q8K406 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Lgi3Q8K406 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lgi3Q8K406 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lgi3Q8K406 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lgi3Q8K406 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.14■□□□□ 0.49
Lgi3Q8K406 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lgi3Q8K406 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lgi3Q8K406 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Lgi3Q8K406 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lgi3Q8K406 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lgi3Q8K406 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lgi3Q8K406 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lgi3Q8K406 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lgi3Q8K406 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lgi3Q8K406 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lgi3Q8K406 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lgi3Q8K406 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Gm27502-201ENSMUST00000183495 199 ntBASIC18.12■□□□□ 0.49
Lgi3Q8K406 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lgi3Q8K406 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lgi3Q8K406 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms