Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mrpl47Q8K2Y7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mrpl47Q8K2Y7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mrpl47Q8K2Y7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Mrpl47Q8K2Y7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Gm9806-201ENSMUST00000051080 552 ntBASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Mrpl47Q8K2Y7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Mrpl47Q8K2Y7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Mrpl47Q8K2Y7 Scarna2-201ENSMUST00000157560 414 ntBASIC21.1■□□□□ 0.97
Mrpl47Q8K2Y7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mrpl47Q8K2Y7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Mrpl47Q8K2Y7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Mrpl47Q8K2Y7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mrpl47Q8K2Y7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.08■□□□□ 0.97
Mrpl47Q8K2Y7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Mrpl47Q8K2Y7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mrpl47Q8K2Y7 Gm16437-201ENSMUST00000025669 507 ntBASIC21.08■□□□□ 0.97
Mrpl47Q8K2Y7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mrpl47Q8K2Y7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl47Q8K2Y7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl47Q8K2Y7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.07■□□□□ 0.96
Mrpl47Q8K2Y7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl47Q8K2Y7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl47Q8K2Y7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrpl47Q8K2Y7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrpl47Q8K2Y7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrpl47Q8K2Y7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrpl47Q8K2Y7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mrpl47Q8K2Y7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl47Q8K2Y7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl47Q8K2Y7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl47Q8K2Y7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl47Q8K2Y7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl47Q8K2Y7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl47Q8K2Y7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Mrpl47Q8K2Y7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl47Q8K2Y7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Gm11687-201ENSMUST00000118911 886 ntBASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl47Q8K2Y7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl47Q8K2Y7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl47Q8K2Y7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrpl47Q8K2Y7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrpl47Q8K2Y7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Mrpl47Q8K2Y7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.01■□□□□ 0.95
Mrpl47Q8K2Y7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Mrpl47Q8K2Y7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Mrpl47Q8K2Y7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mrpl47Q8K2Y7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl47Q8K2Y7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Mrpl47Q8K2Y7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl47Q8K2Y7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl47Q8K2Y7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Mrpl47Q8K2Y7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl47Q8K2Y7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl47Q8K2Y7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl47Q8K2Y7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Mrpl47Q8K2Y7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl47Q8K2Y7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 159.1 ms