Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scamp1Q8K021 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Scamp1Q8K021 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Scamp1Q8K021 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scamp1Q8K021 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.84■□□□□ 0.93
Scamp1Q8K021 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scamp1Q8K021 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.84■□□□□ 0.93
Scamp1Q8K021 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Scamp1Q8K021 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.84■□□□□ 0.93
Scamp1Q8K021 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.84■□□□□ 0.93
Scamp1Q8K021 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scamp1Q8K021 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scamp1Q8K021 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Scamp1Q8K021 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.83■□□□□ 0.93
Scamp1Q8K021 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.83■□□□□ 0.93
Scamp1Q8K021 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.83■□□□□ 0.93
Scamp1Q8K021 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scamp1Q8K021 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scamp1Q8K021 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scamp1Q8K021 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scamp1Q8K021 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.82■□□□□ 0.92
Scamp1Q8K021 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.82■□□□□ 0.92
Scamp1Q8K021 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.82■□□□□ 0.92
Scamp1Q8K021 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scamp1Q8K021 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scamp1Q8K021 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scamp1Q8K021 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Scamp1Q8K021 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Scamp1Q8K021 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Gm7417-201ENSMUST00000192950 473 ntBASIC20.81■□□□□ 0.92
Scamp1Q8K021 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.81■□□□□ 0.92
Scamp1Q8K021 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scamp1Q8K021 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scamp1Q8K021 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scamp1Q8K021 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.79■□□□□ 0.92
Scamp1Q8K021 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Scamp1Q8K021 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Scamp1Q8K021 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scamp1Q8K021 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scamp1Q8K021 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Scamp1Q8K021 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.78■□□□□ 0.92
Scamp1Q8K021 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.78■□□□□ 0.92
Scamp1Q8K021 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scamp1Q8K021 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.77■□□□□ 0.92
Scamp1Q8K021 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scamp1Q8K021 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.77■□□□□ 0.92
Scamp1Q8K021 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.77■□□□□ 0.92
Scamp1Q8K021 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scamp1Q8K021 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scamp1Q8K021 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.76■□□□□ 0.91
Scamp1Q8K021 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.76■□□□□ 0.91
Scamp1Q8K021 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.76■□□□□ 0.91
Scamp1Q8K021 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scamp1Q8K021 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scamp1Q8K021 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scamp1Q8K021 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scamp1Q8K021 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp1Q8K021 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Scamp1Q8K021 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.75■□□□□ 0.91
Scamp1Q8K021 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp1Q8K021 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp1Q8K021 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp1Q8K021 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scamp1Q8K021 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.74■□□□□ 0.91
Scamp1Q8K021 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Scamp1Q8K021 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scamp1Q8K021 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.73■□□□□ 0.91
Scamp1Q8K021 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scamp1Q8K021 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms