Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trpm6Q8CIR4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trpm6Q8CIR4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trpm6Q8CIR4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trpm6Q8CIR4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trpm6Q8CIR4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trpm6Q8CIR4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Trpm6Q8CIR4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trpm6Q8CIR4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trpm6Q8CIR4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.62■■□□□ 1.05
Trpm6Q8CIR4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trpm6Q8CIR4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.61■■□□□ 1.05
Trpm6Q8CIR4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trpm6Q8CIR4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Trpm6Q8CIR4 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.61■■□□□ 1.05
Trpm6Q8CIR4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpm6Q8CIR4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trpm6Q8CIR4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpm6Q8CIR4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpm6Q8CIR4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trpm6Q8CIR4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.6■■□□□ 1.05
Trpm6Q8CIR4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpm6Q8CIR4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Trpm6Q8CIR4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trpm6Q8CIR4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trpm6Q8CIR4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trpm6Q8CIR4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.59■■□□□ 1.05
Trpm6Q8CIR4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.59■■□□□ 1.05
Trpm6Q8CIR4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trpm6Q8CIR4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trpm6Q8CIR4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trpm6Q8CIR4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trpm6Q8CIR4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trpm6Q8CIR4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Trpm6Q8CIR4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trpm6Q8CIR4 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.58■■□□□ 1.04
Trpm6Q8CIR4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trpm6Q8CIR4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trpm6Q8CIR4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trpm6Q8CIR4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.57■■□□□ 1.04
Trpm6Q8CIR4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trpm6Q8CIR4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Trpm6Q8CIR4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Trpm6Q8CIR4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.56■■□□□ 1.04
Trpm6Q8CIR4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trpm6Q8CIR4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trpm6Q8CIR4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trpm6Q8CIR4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.56■■□□□ 1.04
Trpm6Q8CIR4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Trpm6Q8CIR4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpm6Q8CIR4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trpm6Q8CIR4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpm6Q8CIR4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpm6Q8CIR4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.55■■□□□ 1.04
Trpm6Q8CIR4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trpm6Q8CIR4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trpm6Q8CIR4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trpm6Q8CIR4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trpm6Q8CIR4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trpm6Q8CIR4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Trpm6Q8CIR4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trpm6Q8CIR4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trpm6Q8CIR4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trpm6Q8CIR4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.54■■□□□ 1.04
Trpm6Q8CIR4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.53■■□□□ 1.04
Trpm6Q8CIR4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trpm6Q8CIR4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trpm6Q8CIR4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.53■■□□□ 1.04
Trpm6Q8CIR4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.53■■□□□ 1.04
Trpm6Q8CIR4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trpm6Q8CIR4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trpm6Q8CIR4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Trpm6Q8CIR4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trpm6Q8CIR4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Trpm6Q8CIR4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Trpm6Q8CIR4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 Golgb1-201ENSMUST00000023534 498 ntBASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trpm6Q8CIR4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trpm6Q8CIR4 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.5■■□□□ 1.03
Trpm6Q8CIR4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trpm6Q8CIR4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trpm6Q8CIR4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trpm6Q8CIR4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trpm6Q8CIR4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.5■■□□□ 1.03
Trpm6Q8CIR4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trpm6Q8CIR4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trpm6Q8CIR4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.49■■□□□ 1.03
Trpm6Q8CIR4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trpm6Q8CIR4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trpm6Q8CIR4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trpm6Q8CIR4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms