Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Zc3h3Q8CHP0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Zc3h3Q8CHP0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zc3h3Q8CHP0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zc3h3Q8CHP0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zc3h3Q8CHP0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.34■■□□□ 1.01
Zc3h3Q8CHP0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.33■■□□□ 1.01
Zc3h3Q8CHP0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.33■■□□□ 1.01
Zc3h3Q8CHP0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h3Q8CHP0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h3Q8CHP0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Zc3h3Q8CHP0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.33■■□□□ 1
Zc3h3Q8CHP0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Zc3h3Q8CHP0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3h3Q8CHP0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h3Q8CHP0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h3Q8CHP0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Zc3h3Q8CHP0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h3Q8CHP0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Zc3h3Q8CHP0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h3Q8CHP0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zc3h3Q8CHP0 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.31■■□□□ 1
Zc3h3Q8CHP0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h3Q8CHP0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3h3Q8CHP0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3h3Q8CHP0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.3■■□□□ 1
Zc3h3Q8CHP0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.3■■□□□ 1
Zc3h3Q8CHP0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3h3Q8CHP0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3h3Q8CHP0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zc3h3Q8CHP0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Zc3h3Q8CHP0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3h3Q8CHP0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3h3Q8CHP0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zc3h3Q8CHP0 Gm8493-201ENSMUST00000196881 489 ntBASIC21.28■■□□□ 1
Zc3h3Q8CHP0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.28■■□□□ 1
Zc3h3Q8CHP0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.28■■□□□ 1
Zc3h3Q8CHP0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.28■■□□□ 1
Zc3h3Q8CHP0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.28■■□□□ 1
Zc3h3Q8CHP0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h3Q8CHP0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zc3h3Q8CHP0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h3Q8CHP0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zc3h3Q8CHP0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h3Q8CHP0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h3Q8CHP0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h3Q8CHP0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Zc3h3Q8CHP0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Zc3h3Q8CHP0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h3Q8CHP0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Zc3h3Q8CHP0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Zc3h3Q8CHP0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h3Q8CHP0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.25■□□□□ 0.99
Zc3h3Q8CHP0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Zc3h3Q8CHP0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Zc3h3Q8CHP0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Zc3h3Q8CHP0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h3Q8CHP0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h3Q8CHP0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h3Q8CHP0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.24■□□□□ 0.99
Zc3h3Q8CHP0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Zc3h3Q8CHP0 Gm27011-201ENSMUST00000182352 972 ntBASIC21.24■□□□□ 0.99
Zc3h3Q8CHP0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h3Q8CHP0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3h3Q8CHP0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.23■□□□□ 0.99
Zc3h3Q8CHP0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.23■□□□□ 0.99
Zc3h3Q8CHP0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3h3Q8CHP0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3h3Q8CHP0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h3Q8CHP0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h3Q8CHP0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h3Q8CHP0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h3Q8CHP0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h3Q8CHP0 Gm27405-201ENSMUST00000184201 112 ntBASIC21.22■□□□□ 0.99
Zc3h3Q8CHP0 Gm42569-201ENSMUST00000200539 472 ntBASIC21.22■□□□□ 0.99
Zc3h3Q8CHP0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h3Q8CHP0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Zc3h3Q8CHP0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h3Q8CHP0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h3Q8CHP0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h3Q8CHP0 Gm26571-201ENSMUST00000181399 666 ntBASIC21.2■□□□□ 0.98
Zc3h3Q8CHP0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Zc3h3Q8CHP0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h3Q8CHP0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h3Q8CHP0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.19■□□□□ 0.98
Zc3h3Q8CHP0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h3Q8CHP0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h3Q8CHP0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h3Q8CHP0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h3Q8CHP0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h3Q8CHP0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms