Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ppp4r4Q8C0Y0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ppp4r4Q8C0Y0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ppp4r4Q8C0Y0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ppp4r4Q8C0Y0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ppp4r4Q8C0Y0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ppp4r4Q8C0Y0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ppp4r4Q8C0Y0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ppp4r4Q8C0Y0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ppp4r4Q8C0Y0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ppp4r4Q8C0Y0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ppp4r4Q8C0Y0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp4r4Q8C0Y0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.37■■□□□ 1.01
Ppp4r4Q8C0Y0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.37■■□□□ 1.01
Ppp4r4Q8C0Y0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp4r4Q8C0Y0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp4r4Q8C0Y0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp4r4Q8C0Y0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ppp4r4Q8C0Y0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp4r4Q8C0Y0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ppp4r4Q8C0Y0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ppp4r4Q8C0Y0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ppp4r4Q8C0Y0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ppp4r4Q8C0Y0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ppp4r4Q8C0Y0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ppp4r4Q8C0Y0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ppp4r4Q8C0Y0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r4Q8C0Y0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r4Q8C0Y0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r4Q8C0Y0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r4Q8C0Y0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r4Q8C0Y0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r4Q8C0Y0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r4Q8C0Y0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r4Q8C0Y0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp4r4Q8C0Y0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp4r4Q8C0Y0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ppp4r4Q8C0Y0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ppp4r4Q8C0Y0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.33■■□□□ 1
Ppp4r4Q8C0Y0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Ppp4r4Q8C0Y0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ppp4r4Q8C0Y0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Ppp4r4Q8C0Y0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp4r4Q8C0Y0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Ppp4r4Q8C0Y0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r4Q8C0Y0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r4Q8C0Y0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp4r4Q8C0Y0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ppp4r4Q8C0Y0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r4Q8C0Y0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r4Q8C0Y0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r4Q8C0Y0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r4Q8C0Y0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ppp4r4Q8C0Y0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r4Q8C0Y0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp4r4Q8C0Y0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r4Q8C0Y0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r4Q8C0Y0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Ppp4r4Q8C0Y0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r4Q8C0Y0 Gm13238-201ENSMUST00000117655 780 ntBASIC21.28■■□□□ 1
Ppp4r4Q8C0Y0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r4Q8C0Y0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ppp4r4Q8C0Y0 Gm45444-201ENSMUST00000211394 898 ntBASIC21.28■■□□□ 1
Ppp4r4Q8C0Y0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp4r4Q8C0Y0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms