Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3dQ8BX13 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3dQ8BX13 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.83■□□□□ 0.6
Ube3dQ8BX13 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.83■□□□□ 0.6
Ube3dQ8BX13 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3dQ8BX13 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.83■□□□□ 0.6
Ube3dQ8BX13 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3dQ8BX13 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.82■□□□□ 0.6
Ube3dQ8BX13 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3dQ8BX13 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ube3dQ8BX13 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3dQ8BX13 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3dQ8BX13 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ube3dQ8BX13 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3dQ8BX13 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3dQ8BX13 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3dQ8BX13 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3dQ8BX13 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.81■□□□□ 0.6
Ube3dQ8BX13 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3dQ8BX13 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.81■□□□□ 0.6
Ube3dQ8BX13 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3dQ8BX13 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3dQ8BX13 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Ube3dQ8BX13 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3dQ8BX13 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3dQ8BX13 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3dQ8BX13 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3dQ8BX13 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3dQ8BX13 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3dQ8BX13 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3dQ8BX13 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ube3dQ8BX13 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3dQ8BX13 Gm45444-201ENSMUST00000211394 898 ntBASIC18.78■□□□□ 0.6
Ube3dQ8BX13 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3dQ8BX13 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3dQ8BX13 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3dQ8BX13 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3dQ8BX13 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3dQ8BX13 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ube3dQ8BX13 Gm13238-201ENSMUST00000117655 780 ntBASIC18.77■□□□□ 0.6
Ube3dQ8BX13 Gm43566-201ENSMUST00000196851 808 ntBASIC18.77■□□□□ 0.6
Ube3dQ8BX13 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3dQ8BX13 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3dQ8BX13 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3dQ8BX13 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ube3dQ8BX13 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ube3dQ8BX13 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3dQ8BX13 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3dQ8BX13 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.76■□□□□ 0.59
Ube3dQ8BX13 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.76■□□□□ 0.59
Ube3dQ8BX13 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3dQ8BX13 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3dQ8BX13 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3dQ8BX13 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3dQ8BX13 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3dQ8BX13 Gm15546-201ENSMUST00000122095 826 ntBASIC18.75■□□□□ 0.59
Ube3dQ8BX13 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.75■□□□□ 0.59
Ube3dQ8BX13 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ube3dQ8BX13 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3dQ8BX13 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3dQ8BX13 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Ube3dQ8BX13 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3dQ8BX13 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3dQ8BX13 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3dQ8BX13 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3dQ8BX13 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3dQ8BX13 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3dQ8BX13 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ube3dQ8BX13 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3dQ8BX13 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3dQ8BX13 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3dQ8BX13 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ube3dQ8BX13 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ube3dQ8BX13 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3dQ8BX13 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
Ube3dQ8BX13 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3dQ8BX13 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3dQ8BX13 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3dQ8BX13 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3dQ8BX13 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.71■□□□□ 0.59
Ube3dQ8BX13 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms