Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm22567-201ENSMUST00000175542 342 ntBASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Prpf18Q8BM39 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf18Q8BM39 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf18Q8BM39 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Prpf18Q8BM39 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.08■□□□□ 0.81
Prpf18Q8BM39 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf18Q8BM39 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf18Q8BM39 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf18Q8BM39 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf18Q8BM39 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Gm6311-201ENSMUST00000073790 878 ntBASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf18Q8BM39 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf18Q8BM39 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Prpf18Q8BM39 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf18Q8BM39 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf18Q8BM39 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf18Q8BM39 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf18Q8BM39 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Prpf18Q8BM39 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf18Q8BM39 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf18Q8BM39 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf18Q8BM39 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Prpf18Q8BM39 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf18Q8BM39 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf18Q8BM39 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.05■□□□□ 0.8
Prpf18Q8BM39 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf18Q8BM39 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.05■□□□□ 0.8
Prpf18Q8BM39 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Prpf18Q8BM39 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf18Q8BM39 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf18Q8BM39 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf18Q8BM39 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf18Q8BM39 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf18Q8BM39 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf18Q8BM39 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf18Q8BM39 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf18Q8BM39 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.04■□□□□ 0.8
Prpf18Q8BM39 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf18Q8BM39 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf18Q8BM39 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Prpf18Q8BM39 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Prpf18Q8BM39 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.03■□□□□ 0.8
Prpf18Q8BM39 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf18Q8BM39 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.03■□□□□ 0.8
Prpf18Q8BM39 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf18Q8BM39 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf18Q8BM39 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf18Q8BM39 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Prpf18Q8BM39 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf18Q8BM39 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf18Q8BM39 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.02■□□□□ 0.8
Prpf18Q8BM39 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf18Q8BM39 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf18Q8BM39 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.01■□□□□ 0.79
Prpf18Q8BM39 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf18Q8BM39 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.01■□□□□ 0.79
Prpf18Q8BM39 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf18Q8BM39 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Prpf18Q8BM39 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf18Q8BM39 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf18Q8BM39 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prpf18Q8BM39 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Prpf18Q8BM39 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf18Q8BM39 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf18Q8BM39 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20■□□□□ 0.79
Prpf18Q8BM39 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf18Q8BM39 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf18Q8BM39 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf18Q8BM39 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf18Q8BM39 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf18Q8BM39 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 182.1 ms