Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm22567-201ENSMUST00000175542 342 ntBASIC18.48■□□□□ 0.55
Srrm4Q8BKA3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm4Q8BKA3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm4Q8BKA3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm4Q8BKA3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srrm4Q8BKA3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm4Q8BKA3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm4Q8BKA3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm4Q8BKA3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm4Q8BKA3 Gm43566-201ENSMUST00000196851 808 ntBASIC18.47■□□□□ 0.55
Srrm4Q8BKA3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Srrm4Q8BKA3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srrm4Q8BKA3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm4Q8BKA3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm4Q8BKA3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm4Q8BKA3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srrm4Q8BKA3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.46■□□□□ 0.55
Srrm4Q8BKA3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Srrm4Q8BKA3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm4Q8BKA3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm4Q8BKA3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.45■□□□□ 0.54
Srrm4Q8BKA3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.45■□□□□ 0.54
Srrm4Q8BKA3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Srrm4Q8BKA3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Srrm4Q8BKA3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srrm4Q8BKA3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm4Q8BKA3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm4Q8BKA3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Srrm4Q8BKA3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Srrm4Q8BKA3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm4Q8BKA3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.43■□□□□ 0.54
Srrm4Q8BKA3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm4Q8BKA3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.43■□□□□ 0.54
Srrm4Q8BKA3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm4Q8BKA3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm4Q8BKA3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm4Q8BKA3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Srrm4Q8BKA3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm4Q8BKA3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm4Q8BKA3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm4Q8BKA3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm4Q8BKA3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm4Q8BKA3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.42■□□□□ 0.54
Srrm4Q8BKA3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm4Q8BKA3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm4Q8BKA3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm4Q8BKA3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm4Q8BKA3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Srrm4Q8BKA3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm4Q8BKA3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm4Q8BKA3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm4Q8BKA3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Srrm4Q8BKA3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
Srrm4Q8BKA3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Srrm4Q8BKA3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm4Q8BKA3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 Gm5812-201ENSMUST00000061073 957 ntBASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm4Q8BKA3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Srrm4Q8BKA3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Srrm4Q8BKA3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm4Q8BKA3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm4Q8BKA3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm4Q8BKA3 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.39■□□□□ 0.53
Srrm4Q8BKA3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm4Q8BKA3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm4Q8BKA3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Srrm4Q8BKA3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm4Q8BKA3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Srrm4Q8BKA3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Srrm4Q8BKA3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm4Q8BKA3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm4Q8BKA3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm4Q8BKA3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm4Q8BKA3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm4Q8BKA3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm4Q8BKA3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm4Q8BKA3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.37■□□□□ 0.53
Srrm4Q8BKA3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.37■□□□□ 0.53
Srrm4Q8BKA3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm4Q8BKA3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srrm4Q8BKA3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm4Q8BKA3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm4Q8BKA3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Srrm4Q8BKA3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srrm4Q8BKA3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.35■□□□□ 0.53
Srrm4Q8BKA3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Srrm4Q8BKA3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srrm4Q8BKA3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Srrm4Q8BKA3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Srrm4Q8BKA3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.35■□□□□ 0.53
Srrm4Q8BKA3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.35■□□□□ 0.53
Srrm4Q8BKA3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms