Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox3Q8BIF2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox3Q8BIF2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rbfox3Q8BIF2 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.29■□□□□ 0.2
Rbfox3Q8BIF2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox3Q8BIF2 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.28■□□□□ 0.2
Rbfox3Q8BIF2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox3Q8BIF2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Rbfox3Q8BIF2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox3Q8BIF2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox3Q8BIF2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox3Q8BIF2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rbfox3Q8BIF2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox3Q8BIF2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rbfox3Q8BIF2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rbfox3Q8BIF2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rbfox3Q8BIF2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rbfox3Q8BIF2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rbfox3Q8BIF2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rbfox3Q8BIF2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rbfox3Q8BIF2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rbfox3Q8BIF2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rbfox3Q8BIF2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rbfox3Q8BIF2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rbfox3Q8BIF2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rbfox3Q8BIF2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox3Q8BIF2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rbfox3Q8BIF2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox3Q8BIF2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox3Q8BIF2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rbfox3Q8BIF2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.23■□□□□ 0.19
Rbfox3Q8BIF2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rbfox3Q8BIF2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rbfox3Q8BIF2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rbfox3Q8BIF2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rbfox3Q8BIF2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Rbfox3Q8BIF2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rbfox3Q8BIF2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rbfox3Q8BIF2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rbfox3Q8BIF2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rbfox3Q8BIF2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rbfox3Q8BIF2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rbfox3Q8BIF2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Rbfox3Q8BIF2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rbfox3Q8BIF2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms