Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim23Q8BGX0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim23Q8BGX0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim23Q8BGX0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Trim23Q8BGX0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim23Q8BGX0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim23Q8BGX0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim23Q8BGX0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim23Q8BGX0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim23Q8BGX0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim23Q8BGX0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.59■□□□□ 0.89
Trim23Q8BGX0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim23Q8BGX0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim23Q8BGX0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim23Q8BGX0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim23Q8BGX0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim23Q8BGX0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim23Q8BGX0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim23Q8BGX0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim23Q8BGX0 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.58■□□□□ 0.89
Trim23Q8BGX0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim23Q8BGX0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trim23Q8BGX0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim23Q8BGX0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim23Q8BGX0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim23Q8BGX0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim23Q8BGX0 Gm15820-201ENSMUST00000201566 728 ntBASIC20.57■□□□□ 0.88
Trim23Q8BGX0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim23Q8BGX0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Trim23Q8BGX0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim23Q8BGX0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim23Q8BGX0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Trim23Q8BGX0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim23Q8BGX0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim23Q8BGX0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim23Q8BGX0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim23Q8BGX0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim23Q8BGX0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim23Q8BGX0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim23Q8BGX0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim23Q8BGX0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim23Q8BGX0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim23Q8BGX0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim23Q8BGX0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim23Q8BGX0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Trim23Q8BGX0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.53■□□□□ 0.88
Trim23Q8BGX0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim23Q8BGX0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim23Q8BGX0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.53■□□□□ 0.88
Trim23Q8BGX0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim23Q8BGX0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim23Q8BGX0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim23Q8BGX0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim23Q8BGX0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim23Q8BGX0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim23Q8BGX0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms