Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vrk1Q80X41 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Vrk1Q80X41 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vrk1Q80X41 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vrk1Q80X41 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk1Q80X41 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk1Q80X41 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk1Q80X41 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk1Q80X41 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk1Q80X41 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk1Q80X41 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.35■□□□□ 0.85
Vrk1Q80X41 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk1Q80X41 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk1Q80X41 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk1Q80X41 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk1Q80X41 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk1Q80X41 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vrk1Q80X41 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk1Q80X41 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk1Q80X41 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk1Q80X41 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Vrk1Q80X41 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vrk1Q80X41 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vrk1Q80X41 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vrk1Q80X41 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Vrk1Q80X41 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vrk1Q80X41 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.33■□□□□ 0.84
Vrk1Q80X41 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Vrk1Q80X41 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vrk1Q80X41 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vrk1Q80X41 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vrk1Q80X41 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vrk1Q80X41 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vrk1Q80X41 Gm21956-201ENSMUST00000179946 522 ntBASIC20.31■□□□□ 0.84
Vrk1Q80X41 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vrk1Q80X41 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vrk1Q80X41 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vrk1Q80X41 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vrk1Q80X41 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vrk1Q80X41 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.3■□□□□ 0.84
Vrk1Q80X41 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vrk1Q80X41 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vrk1Q80X41 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vrk1Q80X41 Gm12922-201ENSMUST00000120626 809 ntBASIC20.29■□□□□ 0.84
Vrk1Q80X41 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vrk1Q80X41 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vrk1Q80X41 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vrk1Q80X41 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.28■□□□□ 0.84
Vrk1Q80X41 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vrk1Q80X41 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vrk1Q80X41 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vrk1Q80X41 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.27■□□□□ 0.84
Vrk1Q80X41 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vrk1Q80X41 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vrk1Q80X41 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vrk1Q80X41 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vrk1Q80X41 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.27■□□□□ 0.84
Vrk1Q80X41 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Vrk1Q80X41 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Vrk1Q80X41 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vrk1Q80X41 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk1Q80X41 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vrk1Q80X41 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vrk1Q80X41 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.25■□□□□ 0.83
Vrk1Q80X41 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.25■□□□□ 0.83
Vrk1Q80X41 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vrk1Q80X41 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Vrk1Q80X41 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vrk1Q80X41 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.24■□□□□ 0.83
Vrk1Q80X41 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.24■□□□□ 0.83
Vrk1Q80X41 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vrk1Q80X41 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vrk1Q80X41 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Vrk1Q80X41 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vrk1Q80X41 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vrk1Q80X41 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vrk1Q80X41 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vrk1Q80X41 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.22■□□□□ 0.83
Vrk1Q80X41 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vrk1Q80X41 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Vrk1Q80X41 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.22■□□□□ 0.83
Vrk1Q80X41 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vrk1Q80X41 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vrk1Q80X41 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vrk1Q80X41 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vrk1Q80X41 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
Vrk1Q80X41 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vrk1Q80X41 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms