Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rif1Q6PR54 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rif1Q6PR54 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rif1Q6PR54 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rif1Q6PR54 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.36■□□□□ 0.53
Rif1Q6PR54 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rif1Q6PR54 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rif1Q6PR54 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rif1Q6PR54 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rif1Q6PR54 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rif1Q6PR54 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rif1Q6PR54 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rif1Q6PR54 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rif1Q6PR54 Gm43173-201ENSMUST00000202246 593 ntBASIC18.35■□□□□ 0.53
Rif1Q6PR54 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rif1Q6PR54 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rif1Q6PR54 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rif1Q6PR54 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rif1Q6PR54 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rif1Q6PR54 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.33■□□□□ 0.52
Rif1Q6PR54 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rif1Q6PR54 AV356131-201ENSMUST00000206201 750 ntBASIC18.32■□□□□ 0.52
Rif1Q6PR54 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.32■□□□□ 0.52
Rif1Q6PR54 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rif1Q6PR54 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.32■□□□□ 0.52
Rif1Q6PR54 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rif1Q6PR54 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rif1Q6PR54 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rif1Q6PR54 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rif1Q6PR54 Gm10602-201ENSMUST00000098239 609 ntBASIC18.31■□□□□ 0.52
Rif1Q6PR54 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rif1Q6PR54 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rif1Q6PR54 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rif1Q6PR54 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rif1Q6PR54 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rif1Q6PR54 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rif1Q6PR54 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rif1Q6PR54 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rif1Q6PR54 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rif1Q6PR54 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rif1Q6PR54 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rif1Q6PR54 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rif1Q6PR54 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.29■□□□□ 0.52
Rif1Q6PR54 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rif1Q6PR54 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Gm10033-202ENSMUST00000211874 928 ntBASIC18.28■□□□□ 0.52
Rif1Q6PR54 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rif1Q6PR54 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.28■□□□□ 0.52
Rif1Q6PR54 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rif1Q6PR54 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.27■□□□□ 0.52
Rif1Q6PR54 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.27■□□□□ 0.52
Rif1Q6PR54 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.27■□□□□ 0.52
Rif1Q6PR54 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.27■□□□□ 0.52
Rif1Q6PR54 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.27■□□□□ 0.52
Rif1Q6PR54 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rif1Q6PR54 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Rif1Q6PR54 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rif1Q6PR54 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rif1Q6PR54 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rif1Q6PR54 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rif1Q6PR54 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rif1Q6PR54 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rif1Q6PR54 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rif1Q6PR54 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.25■□□□□ 0.51
Rif1Q6PR54 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.25■□□□□ 0.51
Rif1Q6PR54 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rif1Q6PR54 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rif1Q6PR54 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.24■□□□□ 0.51
Rif1Q6PR54 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
Rif1Q6PR54 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rif1Q6PR54 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rif1Q6PR54 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rif1Q6PR54 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.23■□□□□ 0.51
Rif1Q6PR54 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rif1Q6PR54 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rif1Q6PR54 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.23■□□□□ 0.51
Rif1Q6PR54 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rif1Q6PR54 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rif1Q6PR54 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.23■□□□□ 0.51
Rif1Q6PR54 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rif1Q6PR54 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rif1Q6PR54 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rif1Q6PR54 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rif1Q6PR54 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.22■□□□□ 0.51
Rif1Q6PR54 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rif1Q6PR54 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.22■□□□□ 0.51
Rif1Q6PR54 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rif1Q6PR54 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rif1Q6PR54 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rif1Q6PR54 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rif1Q6PR54 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rif1Q6PR54 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms