Protein–RNA interactions for Protein: Q6PDK8

Dtx4, E3 ubiquitin-protein ligase DTX4, mousemouse

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dtx4Q6PDK8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dtx4Q6PDK8 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.57■□□□□ 0.72
Dtx4Q6PDK8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dtx4Q6PDK8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dtx4Q6PDK8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dtx4Q6PDK8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dtx4Q6PDK8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dtx4Q6PDK8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Dtx4Q6PDK8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.57■□□□□ 0.72
Dtx4Q6PDK8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dtx4Q6PDK8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dtx4Q6PDK8 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.56■□□□□ 0.72
Dtx4Q6PDK8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Dtx4Q6PDK8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.56■□□□□ 0.72
Dtx4Q6PDK8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.56■□□□□ 0.72
Dtx4Q6PDK8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Dtx4Q6PDK8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Dtx4Q6PDK8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dtx4Q6PDK8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Gm12366-201ENSMUST00000121722 873 ntBASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Gm5786-201ENSMUST00000085368 882 ntBASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dtx4Q6PDK8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Dtx4Q6PDK8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.54■□□□□ 0.72
Dtx4Q6PDK8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Dtx4Q6PDK8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Dtx4Q6PDK8 Gm27502-201ENSMUST00000183495 199 ntBASIC19.54■□□□□ 0.72
Dtx4Q6PDK8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Dtx4Q6PDK8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Gm14523-201ENSMUST00000117260 558 ntBASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dtx4Q6PDK8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Dtx4Q6PDK8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Dtx4Q6PDK8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Dtx4Q6PDK8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.52■□□□□ 0.72
Dtx4Q6PDK8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Dtx4Q6PDK8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Dtx4Q6PDK8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Dtx4Q6PDK8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Dtx4Q6PDK8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.52■□□□□ 0.71
Dtx4Q6PDK8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dtx4Q6PDK8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Dtx4Q6PDK8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dtx4Q6PDK8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dtx4Q6PDK8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dtx4Q6PDK8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Dtx4Q6PDK8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dtx4Q6PDK8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dtx4Q6PDK8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dtx4Q6PDK8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dtx4Q6PDK8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dtx4Q6PDK8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dtx4Q6PDK8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Dtx4Q6PDK8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Dtx4Q6PDK8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dtx4Q6PDK8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dtx4Q6PDK8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dtx4Q6PDK8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dtx4Q6PDK8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dtx4Q6PDK8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dtx4Q6PDK8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dtx4Q6PDK8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dtx4Q6PDK8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dtx4Q6PDK8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.48■□□□□ 0.71
Dtx4Q6PDK8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Dtx4Q6PDK8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.48■□□□□ 0.71
Dtx4Q6PDK8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dtx4Q6PDK8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Dtx4Q6PDK8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.47■□□□□ 0.71
Dtx4Q6PDK8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Dtx4Q6PDK8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dtx4Q6PDK8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Dtx4Q6PDK8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Dtx4Q6PDK8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dtx4Q6PDK8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dtx4Q6PDK8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Dtx4Q6PDK8 Gm7332-201ENSMUST00000118351 454 ntBASIC19.46■□□□□ 0.71
Dtx4Q6PDK8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.46■□□□□ 0.71
Dtx4Q6PDK8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Dtx4Q6PDK8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Dtx4Q6PDK8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Dtx4Q6PDK8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dtx4Q6PDK8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms