Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smarcd3Q6P9Z1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.46■□□□□ 0.71
Smarcd3Q6P9Z1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smarcd3Q6P9Z1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd3Q6P9Z1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smarcd3Q6P9Z1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd3Q6P9Z1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd3Q6P9Z1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.45■□□□□ 0.7
Smarcd3Q6P9Z1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smarcd3Q6P9Z1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd3Q6P9Z1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.45■□□□□ 0.7
Smarcd3Q6P9Z1 Gm16437-201ENSMUST00000025669 507 ntBASIC19.45■□□□□ 0.7
Smarcd3Q6P9Z1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.45■□□□□ 0.7
Smarcd3Q6P9Z1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd3Q6P9Z1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.45■□□□□ 0.7
Smarcd3Q6P9Z1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd3Q6P9Z1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd3Q6P9Z1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd3Q6P9Z1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smarcd3Q6P9Z1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd3Q6P9Z1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Smarcd3Q6P9Z1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd3Q6P9Z1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd3Q6P9Z1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd3Q6P9Z1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd3Q6P9Z1 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.41■□□□□ 0.7
Smarcd3Q6P9Z1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Smarcd3Q6P9Z1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.41■□□□□ 0.7
Smarcd3Q6P9Z1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd3Q6P9Z1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd3Q6P9Z1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smarcd3Q6P9Z1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd3Q6P9Z1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.4■□□□□ 0.7
Smarcd3Q6P9Z1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Smarcd3Q6P9Z1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.4■□□□□ 0.7
Smarcd3Q6P9Z1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd3Q6P9Z1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd3Q6P9Z1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd3Q6P9Z1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
Smarcd3Q6P9Z1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smarcd3Q6P9Z1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.39■□□□□ 0.7
Smarcd3Q6P9Z1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.39■□□□□ 0.69
Smarcd3Q6P9Z1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd3Q6P9Z1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.39■□□□□ 0.69
Smarcd3Q6P9Z1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Smarcd3Q6P9Z1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Smarcd3Q6P9Z1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd3Q6P9Z1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd3Q6P9Z1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd3Q6P9Z1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd3Q6P9Z1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd3Q6P9Z1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd3Q6P9Z1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd3Q6P9Z1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd3Q6P9Z1 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.36■□□□□ 0.69
Smarcd3Q6P9Z1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd3Q6P9Z1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd3Q6P9Z1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd3Q6P9Z1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd3Q6P9Z1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd3Q6P9Z1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarcd3Q6P9Z1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd3Q6P9Z1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd3Q6P9Z1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd3Q6P9Z1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd3Q6P9Z1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd3Q6P9Z1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd3Q6P9Z1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms