Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scube1Q6NZL8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scube1Q6NZL8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Scube1Q6NZL8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube1Q6NZL8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube1Q6NZL8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scube1Q6NZL8 Gm6311-201ENSMUST00000073790 878 ntBASIC20.37■□□□□ 0.85
Scube1Q6NZL8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube1Q6NZL8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scube1Q6NZL8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Scube1Q6NZL8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scube1Q6NZL8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scube1Q6NZL8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scube1Q6NZL8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scube1Q6NZL8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.35■□□□□ 0.85
Scube1Q6NZL8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scube1Q6NZL8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Scube1Q6NZL8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scube1Q6NZL8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Scube1Q6NZL8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Scube1Q6NZL8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Scube1Q6NZL8 Gm37136-201ENSMUST00000194368 194 ntBASIC20.34■□□□□ 0.85
Scube1Q6NZL8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scube1Q6NZL8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scube1Q6NZL8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scube1Q6NZL8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scube1Q6NZL8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scube1Q6NZL8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.33■□□□□ 0.85
Scube1Q6NZL8 Gm22567-201ENSMUST00000175542 342 ntBASIC20.33■□□□□ 0.85
Scube1Q6NZL8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.33■□□□□ 0.85
Scube1Q6NZL8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scube1Q6NZL8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scube1Q6NZL8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scube1Q6NZL8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scube1Q6NZL8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scube1Q6NZL8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scube1Q6NZL8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scube1Q6NZL8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scube1Q6NZL8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scube1Q6NZL8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Scube1Q6NZL8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.32■□□□□ 0.84
Scube1Q6NZL8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Gm4799-201ENSMUST00000095396 657 ntBASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scube1Q6NZL8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube1Q6NZL8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube1Q6NZL8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scube1Q6NZL8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Scube1Q6NZL8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube1Q6NZL8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube1Q6NZL8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.3■□□□□ 0.84
Scube1Q6NZL8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scube1Q6NZL8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scube1Q6NZL8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Scube1Q6NZL8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Scube1Q6NZL8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.28■□□□□ 0.84
Scube1Q6NZL8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Scube1Q6NZL8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.28■□□□□ 0.84
Scube1Q6NZL8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scube1Q6NZL8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scube1Q6NZL8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scube1Q6NZL8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.27■□□□□ 0.84
Scube1Q6NZL8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Scube1Q6NZL8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.27■□□□□ 0.84
Scube1Q6NZL8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scube1Q6NZL8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Scube1Q6NZL8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scube1Q6NZL8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube1Q6NZL8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube1Q6NZL8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube1Q6NZL8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scube1Q6NZL8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube1Q6NZL8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Scube1Q6NZL8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube1Q6NZL8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Scube1Q6NZL8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scube1Q6NZL8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scube1Q6NZL8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scube1Q6NZL8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scube1Q6NZL8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scube1Q6NZL8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms