Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Krt42Q6IFX2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Krt42Q6IFX2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Krt42Q6IFX2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Krt42Q6IFX2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Krt42Q6IFX2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Krt42Q6IFX2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Krt42Q6IFX2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Krt42Q6IFX2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Krt42Q6IFX2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Krt42Q6IFX2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Krt42Q6IFX2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Krt42Q6IFX2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Krt42Q6IFX2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Krt42Q6IFX2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.86■■□□□ 1.09
Krt42Q6IFX2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Krt42Q6IFX2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.86■■□□□ 1.09
Krt42Q6IFX2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Gm4799-201ENSMUST00000095396 657 ntBASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Krt42Q6IFX2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Krt42Q6IFX2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Krt42Q6IFX2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.84■■□□□ 1.09
Krt42Q6IFX2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Krt42Q6IFX2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Krt42Q6IFX2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Krt42Q6IFX2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Krt42Q6IFX2 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.83■■□□□ 1.09
Krt42Q6IFX2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Krt42Q6IFX2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.83■■□□□ 1.09
Krt42Q6IFX2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Krt42Q6IFX2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.83■■□□□ 1.08
Krt42Q6IFX2 Golph3-202ENSMUST00000226517 2359 ntBASIC21.83■■□□□ 1.08
Krt42Q6IFX2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Krt42Q6IFX2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Krt42Q6IFX2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Krt42Q6IFX2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Krt42Q6IFX2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Krt42Q6IFX2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Krt42Q6IFX2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Krt42Q6IFX2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt42Q6IFX2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Krt42Q6IFX2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Krt42Q6IFX2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Krt42Q6IFX2 Terc-201ENSMUST00000082862 423 ntBASIC21.81■■□□□ 1.08
Krt42Q6IFX2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt42Q6IFX2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.81■■□□□ 1.08
Krt42Q6IFX2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt42Q6IFX2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt42Q6IFX2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Krt42Q6IFX2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Krt42Q6IFX2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt42Q6IFX2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Krt42Q6IFX2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt42Q6IFX2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.8■■□□□ 1.08
Krt42Q6IFX2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Krt42Q6IFX2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.79■■□□□ 1.08
Krt42Q6IFX2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Krt42Q6IFX2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt42Q6IFX2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt42Q6IFX2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt42Q6IFX2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt42Q6IFX2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt42Q6IFX2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt42Q6IFX2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt42Q6IFX2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt42Q6IFX2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt42Q6IFX2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt42Q6IFX2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Krt42Q6IFX2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt42Q6IFX2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Krt42Q6IFX2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt42Q6IFX2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.77■■□□□ 1.08
Krt42Q6IFX2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.77■■□□□ 1.08
Krt42Q6IFX2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.77■■□□□ 1.08
Krt42Q6IFX2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.77■■□□□ 1.08
Krt42Q6IFX2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt42Q6IFX2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Krt42Q6IFX2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.77■■□□□ 1.08
Krt42Q6IFX2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt42Q6IFX2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Krt42Q6IFX2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.07
Krt42Q6IFX2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt42Q6IFX2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Krt42Q6IFX2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt42Q6IFX2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.76■■□□□ 1.07
Krt42Q6IFX2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Krt42Q6IFX2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt42Q6IFX2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms