Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Iqck-206ENSMUST00000208658 2891 ntBASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhga7Q6DD96 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.59■□□□□ 0.89
Pcdhga7Q6DD96 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga7Q6DD96 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhga7Q6DD96 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga7Q6DD96 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga7Q6DD96 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Gm11175-201ENSMUST00000116172 543 ntBASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga7Q6DD96 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhga7Q6DD96 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga7Q6DD96 Gm27502-201ENSMUST00000183495 199 ntBASIC20.56■□□□□ 0.88
Pcdhga7Q6DD96 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdhga7Q6DD96 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdhga7Q6DD96 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga7Q6DD96 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga7Q6DD96 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhga7Q6DD96 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga7Q6DD96 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdhga7Q6DD96 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.55■□□□□ 0.88
Pcdhga7Q6DD96 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga7Q6DD96 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga7Q6DD96 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga7Q6DD96 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhga7Q6DD96 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga7Q6DD96 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhga7Q6DD96 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga7Q6DD96 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga7Q6DD96 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga7Q6DD96 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga7Q6DD96 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhga7Q6DD96 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga7Q6DD96 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga7Q6DD96 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga7Q6DD96 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhga7Q6DD96 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdhga7Q6DD96 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga7Q6DD96 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga7Q6DD96 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga7Q6DD96 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga7Q6DD96 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pcdhga7Q6DD96 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga7Q6DD96 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga7Q6DD96 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.52■□□□□ 0.88
Pcdhga7Q6DD96 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhga7Q6DD96 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhga7Q6DD96 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Pcdhga7Q6DD96 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga7Q6DD96 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga7Q6DD96 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga7Q6DD96 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga7Q6DD96 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga7Q6DD96 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga7Q6DD96 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga7Q6DD96 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga7Q6DD96 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga7Q6DD96 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga7Q6DD96 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhga7Q6DD96 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga7Q6DD96 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga7Q6DD96 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga7Q6DD96 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga7Q6DD96 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga7Q6DD96 Gm14523-201ENSMUST00000117260 558 ntBASIC20.49■□□□□ 0.87
Pcdhga7Q6DD96 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga7Q6DD96 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga7Q6DD96 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.48■□□□□ 0.87
Pcdhga7Q6DD96 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga7Q6DD96 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga7Q6DD96 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga7Q6DD96 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms