Protein–RNA interactions for Protein: Q64221

Nhlh2, Helix-loop-helix protein 2, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlh2Q64221 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Nhlh2Q64221 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlh2Q64221 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.37■□□□□ 0.37
Nhlh2Q64221 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlh2Q64221 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlh2Q64221 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlh2Q64221 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlh2Q64221 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlh2Q64221 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.37■□□□□ 0.37
Nhlh2Q64221 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhlh2Q64221 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nhlh2Q64221 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nhlh2Q64221 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhlh2Q64221 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.36■□□□□ 0.37
Nhlh2Q64221 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhlh2Q64221 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhlh2Q64221 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.35■□□□□ 0.37
Nhlh2Q64221 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.35■□□□□ 0.37
Nhlh2Q64221 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhlh2Q64221 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhlh2Q64221 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nhlh2Q64221 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nhlh2Q64221 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhlh2Q64221 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhlh2Q64221 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.33■□□□□ 0.37
Nhlh2Q64221 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Nhlh2Q64221 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Nhlh2Q64221 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhlh2Q64221 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Nhlh2Q64221 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.33■□□□□ 0.36
Nhlh2Q64221 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nhlh2Q64221 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.32■□□□□ 0.36
Nhlh2Q64221 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhlh2Q64221 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.32■□□□□ 0.36
Nhlh2Q64221 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Nhlh2Q64221 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Nhlh2Q64221 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhlh2Q64221 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nhlh2Q64221 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nhlh2Q64221 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhlh2Q64221 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhlh2Q64221 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.31■□□□□ 0.36
Nhlh2Q64221 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhlh2Q64221 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nhlh2Q64221 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Nhlh2Q64221 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhlh2Q64221 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhlh2Q64221 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhlh2Q64221 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhlh2Q64221 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nhlh2Q64221 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nhlh2Q64221 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhlh2Q64221 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhlh2Q64221 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlh2Q64221 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlh2Q64221 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlh2Q64221 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlh2Q64221 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Nhlh2Q64221 Gm44428-201ENSMUST00000204474 874 ntBASIC17.28■□□□□ 0.36
Nhlh2Q64221 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Nhlh2Q64221 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlh2Q64221 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nhlh2Q64221 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.28■□□□□ 0.36
Nhlh2Q64221 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nhlh2Q64221 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nhlh2Q64221 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhlh2Q64221 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhlh2Q64221 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.27■□□□□ 0.36
Nhlh2Q64221 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nhlh2Q64221 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nhlh2Q64221 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nhlh2Q64221 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlh2Q64221 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nhlh2Q64221 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nhlh2Q64221 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlh2Q64221 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlh2Q64221 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlh2Q64221 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlh2Q64221 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlh2Q64221 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlh2Q64221 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nhlh2Q64221 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms