Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.68■□□□□ 0.42
Commd3Q63829 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Commd3Q63829 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Commd3Q63829 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Commd3Q63829 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Commd3Q63829 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Commd3Q63829 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Commd3Q63829 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Commd3Q63829 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Commd3Q63829 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Commd3Q63829 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Commd3Q63829 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Commd3Q63829 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Commd3Q63829 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Commd3Q63829 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Commd3Q63829 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Commd3Q63829 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Commd3Q63829 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Commd3Q63829 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Commd3Q63829 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Commd3Q63829 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Commd3Q63829 Gm22567-201ENSMUST00000175542 342 ntBASIC17.63■□□□□ 0.41
Commd3Q63829 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Commd3Q63829 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Commd3Q63829 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Commd3Q63829 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Commd3Q63829 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Commd3Q63829 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Commd3Q63829 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Commd3Q63829 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Commd3Q63829 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.62■□□□□ 0.41
Commd3Q63829 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Commd3Q63829 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Commd3Q63829 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Commd3Q63829 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Commd3Q63829 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Commd3Q63829 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Commd3Q63829 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Commd3Q63829 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Commd3Q63829 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.61■□□□□ 0.41
Commd3Q63829 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Commd3Q63829 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Commd3Q63829 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Commd3Q63829 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Commd3Q63829 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Commd3Q63829 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Commd3Q63829 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Commd3Q63829 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Commd3Q63829 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Commd3Q63829 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.6■□□□□ 0.41
Commd3Q63829 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Commd3Q63829 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.6■□□□□ 0.41
Commd3Q63829 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Commd3Q63829 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Commd3Q63829 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Commd3Q63829 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Commd3Q63829 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Commd3Q63829 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Commd3Q63829 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Commd3Q63829 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Commd3Q63829 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Commd3Q63829 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Commd3Q63829 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.58■□□□□ 0.41
Commd3Q63829 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.58■□□□□ 0.41
Commd3Q63829 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Commd3Q63829 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.58■□□□□ 0.4
Commd3Q63829 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.58■□□□□ 0.4
Commd3Q63829 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Commd3Q63829 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Commd3Q63829 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Commd3Q63829 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.57■□□□□ 0.4
Commd3Q63829 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.57■□□□□ 0.4
Commd3Q63829 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Commd3Q63829 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Commd3Q63829 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.57■□□□□ 0.4
Commd3Q63829 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Commd3Q63829 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Commd3Q63829 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Commd3Q63829 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Commd3Q63829 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Commd3Q63829 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Commd3Q63829 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Commd3Q63829 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Commd3Q63829 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Commd3Q63829 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Commd3Q63829 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.55■□□□□ 0.4
Commd3Q63829 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.55■□□□□ 0.4
Commd3Q63829 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Commd3Q63829 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Commd3Q63829 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Commd3Q63829 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Commd3Q63829 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Commd3Q63829 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.54■□□□□ 0.4
Commd3Q63829 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Commd3Q63829 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Commd3Q63829 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms