Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sema3bQ62177 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sema3bQ62177 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sema3bQ62177 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sema3bQ62177 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Sema3bQ62177 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3bQ62177 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sema3bQ62177 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.22■□□□□ 0.83
Sema3bQ62177 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3bQ62177 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.22■□□□□ 0.83
Sema3bQ62177 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3bQ62177 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sema3bQ62177 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3bQ62177 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.22■□□□□ 0.83
Sema3bQ62177 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3bQ62177 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3bQ62177 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Sema3bQ62177 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.21■□□□□ 0.83
Sema3bQ62177 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.21■□□□□ 0.83
Sema3bQ62177 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3bQ62177 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3bQ62177 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.21■□□□□ 0.83
Sema3bQ62177 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3bQ62177 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3bQ62177 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Sema3bQ62177 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Sema3bQ62177 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.2■□□□□ 0.82
Sema3bQ62177 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3bQ62177 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.2■□□□□ 0.82
Sema3bQ62177 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3bQ62177 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3bQ62177 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sema3bQ62177 Gm12821-201ENSMUST00000120022 600 ntBASIC20.19■□□□□ 0.82
Sema3bQ62177 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sema3bQ62177 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sema3bQ62177 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.19■□□□□ 0.82
Sema3bQ62177 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.19■□□□□ 0.82
Sema3bQ62177 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sema3bQ62177 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3bQ62177 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3bQ62177 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3bQ62177 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sema3bQ62177 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3bQ62177 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3bQ62177 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.17■□□□□ 0.82
Sema3bQ62177 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3bQ62177 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.17■□□□□ 0.82
Sema3bQ62177 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.17■□□□□ 0.82
Sema3bQ62177 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3bQ62177 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.17■□□□□ 0.82
Sema3bQ62177 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3bQ62177 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3bQ62177 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3bQ62177 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3bQ62177 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3bQ62177 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.16■□□□□ 0.82
Sema3bQ62177 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.16■□□□□ 0.82
Sema3bQ62177 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.16■□□□□ 0.82
Sema3bQ62177 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3bQ62177 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3bQ62177 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3bQ62177 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sema3bQ62177 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Sema3bQ62177 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.15■□□□□ 0.82
Sema3bQ62177 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3bQ62177 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3bQ62177 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3bQ62177 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sema3bQ62177 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sema3bQ62177 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sema3bQ62177 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.14■□□□□ 0.81
Sema3bQ62177 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.14■□□□□ 0.81
Sema3bQ62177 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sema3bQ62177 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.14■□□□□ 0.81
Sema3bQ62177 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sema3bQ62177 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3bQ62177 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3bQ62177 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sema3bQ62177 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sema3bQ62177 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3bQ62177 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3bQ62177 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.12■□□□□ 0.81
Sema3bQ62177 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3bQ62177 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3bQ62177 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sema3bQ62177 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.12■□□□□ 0.81
Sema3bQ62177 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sema3bQ62177 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Sema3bQ62177 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3bQ62177 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3bQ62177 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3bQ62177 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Sema3bQ62177 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3bQ62177 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.11■□□□□ 0.81
Sema3bQ62177 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sema3bQ62177 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3bQ62177 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3bQ62177 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sema3bQ62177 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Sema3bQ62177 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms