Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Foxc1Q61572 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxc1Q61572 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxc1Q61572 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxc1Q61572 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxc1Q61572 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.44■□□□□ 0.06
Foxc1Q61572 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxc1Q61572 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.44■□□□□ 0.06
Foxc1Q61572 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.44■□□□□ 0.06
Foxc1Q61572 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxc1Q61572 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.44■□□□□ 0.06
Foxc1Q61572 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Foxc1Q61572 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxc1Q61572 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.43■□□□□ 0.06
Foxc1Q61572 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxc1Q61572 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.43■□□□□ 0.06
Foxc1Q61572 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxc1Q61572 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxc1Q61572 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxc1Q61572 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxc1Q61572 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxc1Q61572 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Foxc1Q61572 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Foxc1Q61572 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxc1Q61572 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.42■□□□□ 0.06
Foxc1Q61572 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Foxc1Q61572 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Foxc1Q61572 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxc1Q61572 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.42■□□□□ 0.06
Foxc1Q61572 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Foxc1Q61572 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.42■□□□□ 0.06
Foxc1Q61572 Gm45444-201ENSMUST00000211394 898 ntBASIC15.42■□□□□ 0.06
Foxc1Q61572 Notumos-201ENSMUST00000151998 2659 ntBASIC15.42■□□□□ 0.06
Foxc1Q61572 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Foxc1Q61572 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxc1Q61572 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Foxc1Q61572 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Foxc1Q61572 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Foxc1Q61572 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxc1Q61572 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxc1Q61572 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxc1Q61572 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxc1Q61572 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.41■□□□□ 0.06
Foxc1Q61572 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Foxc1Q61572 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.41■□□□□ 0.06
Foxc1Q61572 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxc1Q61572 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Foxc1Q61572 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxc1Q61572 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.41■□□□□ 0.06
Foxc1Q61572 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.41■□□□□ 0.06
Foxc1Q61572 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Foxc1Q61572 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Foxc1Q61572 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxc1Q61572 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxc1Q61572 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxc1Q61572 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxc1Q61572 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Foxc1Q61572 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.4■□□□□ 0.06
Foxc1Q61572 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.4■□□□□ 0.06
Foxc1Q61572 Rps24-207ENSMUST00000224568 714 ntBASIC15.4■□□□□ 0.06
Foxc1Q61572 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.4■□□□□ 0.06
Foxc1Q61572 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Foxc1Q61572 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Foxc1Q61572 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxc1Q61572 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Foxc1Q61572 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Foxc1Q61572 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxc1Q61572 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxc1Q61572 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Foxc1Q61572 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxc1Q61572 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Foxc1Q61572 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxc1Q61572 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.39■□□□□ 0.05
Foxc1Q61572 Gm43566-201ENSMUST00000196851 808 ntBASIC15.39■□□□□ 0.05
Foxc1Q61572 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxc1Q61572 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Foxc1Q61572 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Foxc1Q61572 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Foxc1Q61572 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Foxc1Q61572 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.38■□□□□ 0.05
Foxc1Q61572 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Foxc1Q61572 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Foxc1Q61572 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.38■□□□□ 0.05
Foxc1Q61572 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Foxc1Q61572 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Foxc1Q61572 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxc1Q61572 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Foxc1Q61572 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxc1Q61572 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Foxc1Q61572 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms