Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sim1Q61045 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sim1Q61045 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sim1Q61045 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sim1Q61045 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sim1Q61045 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Sim1Q61045 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sim1Q61045 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sim1Q61045 Gm21956-201ENSMUST00000179946 522 ntBASIC21.11■□□□□ 0.97
Sim1Q61045 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sim1Q61045 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Sim1Q61045 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sim1Q61045 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sim1Q61045 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sim1Q61045 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sim1Q61045 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Sim1Q61045 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sim1Q61045 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sim1Q61045 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sim1Q61045 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sim1Q61045 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.09■□□□□ 0.97
Sim1Q61045 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Sim1Q61045 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.09■□□□□ 0.97
Sim1Q61045 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.09■□□□□ 0.97
Sim1Q61045 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Sim1Q61045 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Sim1Q61045 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sim1Q61045 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sim1Q61045 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.08■□□□□ 0.97
Sim1Q61045 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.08■□□□□ 0.97
Sim1Q61045 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sim1Q61045 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.08■□□□□ 0.96
Sim1Q61045 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sim1Q61045 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Sim1Q61045 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sim1Q61045 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sim1Q61045 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sim1Q61045 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.06■□□□□ 0.96
Sim1Q61045 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sim1Q61045 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sim1Q61045 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sim1Q61045 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sim1Q61045 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sim1Q61045 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sim1Q61045 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sim1Q61045 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sim1Q61045 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.04■□□□□ 0.96
Sim1Q61045 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sim1Q61045 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sim1Q61045 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sim1Q61045 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sim1Q61045 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sim1Q61045 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sim1Q61045 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.03■□□□□ 0.96
Sim1Q61045 Gm22238-201ENSMUST00000175222 88 ntBASIC21.03■□□□□ 0.96
Sim1Q61045 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sim1Q61045 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sim1Q61045 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.02■□□□□ 0.96
Sim1Q61045 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sim1Q61045 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sim1Q61045 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sim1Q61045 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sim1Q61045 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sim1Q61045 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.01■□□□□ 0.95
Sim1Q61045 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.01■□□□□ 0.95
Sim1Q61045 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sim1Q61045 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sim1Q61045 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sim1Q61045 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sim1Q61045 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sim1Q61045 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sim1Q61045 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sim1Q61045 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21■□□□□ 0.95
Sim1Q61045 Appbp2os-202ENSMUST00000206972 447 ntBASIC21■□□□□ 0.95
Sim1Q61045 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Sim1Q61045 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Sim1Q61045 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sim1Q61045 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Sim1Q61045 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sim1Q61045 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.99■□□□□ 0.95
Sim1Q61045 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sim1Q61045 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sim1Q61045 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sim1Q61045 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sim1Q61045 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sim1Q61045 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sim1Q61045 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sim1Q61045 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim1Q61045 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sim1Q61045 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim1Q61045 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sim1Q61045 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.98■□□□□ 0.95
Sim1Q61045 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim1Q61045 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim1Q61045 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim1Q61045 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim1Q61045 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim1Q61045 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sim1Q61045 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sim1Q61045 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms