Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ubr3Q5U430 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC26.77■■□□□ 1.88
Ubr3Q5U430 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Ubr3Q5U430 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.77■■□□□ 1.88
Ubr3Q5U430 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC26.76■■□□□ 1.88
Ubr3Q5U430 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ubr3Q5U430 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ubr3Q5U430 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ubr3Q5U430 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ubr3Q5U430 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ubr3Q5U430 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ubr3Q5U430 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Gm6139-201ENSMUST00000079261 882 ntBASIC26.74■■□□□ 1.87
Ubr3Q5U430 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Ubr3Q5U430 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Ubr3Q5U430 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ubr3Q5U430 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.73■■□□□ 1.87
Ubr3Q5U430 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Ubr3Q5U430 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Ubr3Q5U430 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC26.72■■□□□ 1.87
Ubr3Q5U430 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ubr3Q5U430 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Ubr3Q5U430 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ubr3Q5U430 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.72■■□□□ 1.87
Ubr3Q5U430 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC26.72■■□□□ 1.87
Ubr3Q5U430 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ubr3Q5U430 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ubr3Q5U430 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC26.7■■□□□ 1.87
Ubr3Q5U430 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
Ubr3Q5U430 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ubr3Q5U430 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ubr3Q5U430 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ubr3Q5U430 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ubr3Q5U430 Gm29257-201ENSMUST00000186115 639 ntBASIC26.68■■□□□ 1.86
Ubr3Q5U430 Gm43017-201ENSMUST00000198296 752 ntBASIC26.68■■□□□ 1.86
Ubr3Q5U430 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ubr3Q5U430 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ubr3Q5U430 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ubr3Q5U430 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ubr3Q5U430 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ubr3Q5U430 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ubr3Q5U430 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.67■■□□□ 1.86
Ubr3Q5U430 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ubr3Q5U430 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr3Q5U430 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr3Q5U430 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Ubr3Q5U430 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Ubr3Q5U430 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr3Q5U430 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC26.66■■□□□ 1.86
Ubr3Q5U430 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ubr3Q5U430 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Ubr3Q5U430 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
Ubr3Q5U430 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ubr3Q5U430 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ubr3Q5U430 AC164629.5-201ENSMUST00000220387 632 ntBASIC26.65■■□□□ 1.86
Ubr3Q5U430 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ubr3Q5U430 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ubr3Q5U430 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
Ubr3Q5U430 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.85
Ubr3Q5U430 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ubr3Q5U430 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ubr3Q5U430 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ubr3Q5U430 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ubr3Q5U430 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Ubr3Q5U430 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ubr3Q5U430 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ubr3Q5U430 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Ubr3Q5U430 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Ubr3Q5U430 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ubr3Q5U430 Gm43137-201ENSMUST00000198052 594 ntBASIC26.62■■□□□ 1.85
Ubr3Q5U430 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ubr3Q5U430 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.61■■□□□ 1.85
Ubr3Q5U430 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC26.61■■□□□ 1.85
Ubr3Q5U430 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ubr3Q5U430 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ubr3Q5U430 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ubr3Q5U430 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Ubr3Q5U430 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ubr3Q5U430 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ubr3Q5U430 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ubr3Q5U430 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ubr3Q5U430 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ubr3Q5U430 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ubr3Q5U430 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ubr3Q5U430 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ubr3Q5U430 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Ubr3Q5U430 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ubr3Q5U430 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ubr3Q5U430 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
Ubr3Q5U430 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Ubr3Q5U430 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC26.56■■□□□ 1.84
Ubr3Q5U430 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms