Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-2Q5R1I3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.71■□□□□ 0.11
Trav7-2Q5R1I3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-2Q5R1I3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav7-2Q5R1I3 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.71■□□□□ 0.11
Trav7-2Q5R1I3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-2Q5R1I3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-2Q5R1I3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-2Q5R1I3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7-2Q5R1I3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-2Q5R1I3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7-2Q5R1I3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-2Q5R1I3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-2Q5R1I3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav7-2Q5R1I3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-2Q5R1I3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7-2Q5R1I3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 Gm7332-201ENSMUST00000118351 454 ntBASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 Gm22567-201ENSMUST00000175542 342 ntBASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 Gm27502-201ENSMUST00000183495 199 ntBASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7-2Q5R1I3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7-2Q5R1I3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav7-2Q5R1I3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav7-2Q5R1I3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.67■□□□□ 0.1
Trav7-2Q5R1I3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-2Q5R1I3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-2Q5R1I3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-2Q5R1I3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-2Q5R1I3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-2Q5R1I3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7-2Q5R1I3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7-2Q5R1I3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Gm12366-201ENSMUST00000121722 873 ntBASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Gm5786-201ENSMUST00000085368 882 ntBASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7-2Q5R1I3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav7-2Q5R1I3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7-2Q5R1I3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7-2Q5R1I3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-2Q5R1I3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-2Q5R1I3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms