Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-4Q5R1H9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-4Q5R1H9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav7d-4Q5R1H9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7d-4Q5R1H9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7d-4Q5R1H9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7d-4Q5R1H9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7d-4Q5R1H9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
Trav7d-4Q5R1H9 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.22■□□□□ 0.19
Trav7d-4Q5R1H9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7d-4Q5R1H9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav7d-4Q5R1H9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav7d-4Q5R1H9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-4Q5R1H9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-4Q5R1H9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7d-4Q5R1H9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav7d-4Q5R1H9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7d-4Q5R1H9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav7d-4Q5R1H9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7d-4Q5R1H9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7d-4Q5R1H9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-4Q5R1H9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.17■□□□□ 0.18
Trav7d-4Q5R1H9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-4Q5R1H9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-4Q5R1H9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-4Q5R1H9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-4Q5R1H9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7d-4Q5R1H9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7d-4Q5R1H9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.16■□□□□ 0.18
Trav7d-4Q5R1H9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7d-4Q5R1H9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7d-4Q5R1H9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7d-4Q5R1H9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7d-4Q5R1H9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trav7d-4Q5R1H9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav7d-4Q5R1H9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-4Q5R1H9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.14■□□□□ 0.17
Trav7d-4Q5R1H9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7d-4Q5R1H9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav7d-4Q5R1H9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav7d-4Q5R1H9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7d-4Q5R1H9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7d-4Q5R1H9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7d-4Q5R1H9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-4Q5R1H9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms