Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Gm45364-201ENSMUST00000210883 159 ntBASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trav8d-1Q5R1H8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Gm9812-201ENSMUST00000061934 968 ntBASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav8d-1Q5R1H8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-1Q5R1H8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-1Q5R1H8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-1Q5R1H8 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.28■□□□□ 0.36
Trav8d-1Q5R1H8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8d-1Q5R1H8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav8d-1Q5R1H8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-1Q5R1H8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-1Q5R1H8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.27■□□□□ 0.36
Trav8d-1Q5R1H8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-1Q5R1H8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-1Q5R1H8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.27■□□□□ 0.36
Trav8d-1Q5R1H8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.27■□□□□ 0.35
Trav8d-1Q5R1H8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav8d-1Q5R1H8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Trav8d-1Q5R1H8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav8d-1Q5R1H8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Trav8d-1Q5R1H8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-1Q5R1H8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.26■□□□□ 0.35
Trav8d-1Q5R1H8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav8d-1Q5R1H8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-1Q5R1H8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-1Q5R1H8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-1Q5R1H8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-1Q5R1H8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8d-1Q5R1H8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8d-1Q5R1H8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8d-1Q5R1H8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Trav8d-1Q5R1H8 Gm11687-201ENSMUST00000118911 886 ntBASIC17.25■□□□□ 0.35
Trav8d-1Q5R1H8 Gm9806-201ENSMUST00000051080 552 ntBASIC17.25■□□□□ 0.35
Trav8d-1Q5R1H8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8d-1Q5R1H8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8d-1Q5R1H8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8d-1Q5R1H8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Mir6538-201ENSMUST00000183713 110 ntBASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-1Q5R1H8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-1Q5R1H8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8d-1Q5R1H8 Scarna2-201ENSMUST00000157560 414 ntBASIC17.22■□□□□ 0.35
Trav8d-1Q5R1H8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Trav8d-1Q5R1H8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8d-1Q5R1H8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8d-1Q5R1H8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav8d-1Q5R1H8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav8d-1Q5R1H8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-1Q5R1H8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-1Q5R1H8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-1Q5R1H8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-1Q5R1H8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-1Q5R1H8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav8d-1Q5R1H8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-1Q5R1H8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-1Q5R1H8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Trav8d-1Q5R1H8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms