Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn2bQ56A07 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn2bQ56A07 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scn2bQ56A07 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.06■□□□□ 0.96
Scn2bQ56A07 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Scn2bQ56A07 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn2bQ56A07 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Scn2bQ56A07 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn2bQ56A07 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn2bQ56A07 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn2bQ56A07 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn2bQ56A07 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Scn2bQ56A07 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scn2bQ56A07 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scn2bQ56A07 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn2bQ56A07 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.04■□□□□ 0.96
Scn2bQ56A07 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn2bQ56A07 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn2bQ56A07 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn2bQ56A07 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn2bQ56A07 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn2bQ56A07 Gm14523-201ENSMUST00000117260 558 ntBASIC21.03■□□□□ 0.96
Scn2bQ56A07 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn2bQ56A07 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Scn2bQ56A07 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn2bQ56A07 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.03■□□□□ 0.96
Scn2bQ56A07 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn2bQ56A07 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Scn2bQ56A07 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn2bQ56A07 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn2bQ56A07 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.02■□□□□ 0.96
Scn2bQ56A07 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn2bQ56A07 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.02■□□□□ 0.96
Scn2bQ56A07 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn2bQ56A07 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn2bQ56A07 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn2bQ56A07 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scn2bQ56A07 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scn2bQ56A07 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn2bQ56A07 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn2bQ56A07 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn2bQ56A07 Gm7332-201ENSMUST00000118351 454 ntBASIC21.01■□□□□ 0.95
Scn2bQ56A07 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn2bQ56A07 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn2bQ56A07 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn2bQ56A07 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2bQ56A07 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Scn2bQ56A07 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2bQ56A07 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2bQ56A07 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2bQ56A07 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21■□□□□ 0.95
Scn2bQ56A07 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2bQ56A07 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2bQ56A07 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2bQ56A07 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.99■□□□□ 0.95
Scn2bQ56A07 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn2bQ56A07 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Scn2bQ56A07 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Scn2bQ56A07 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn2bQ56A07 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn2bQ56A07 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.97■□□□□ 0.95
Scn2bQ56A07 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Scn2bQ56A07 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn2bQ56A07 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn2bQ56A07 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn2bQ56A07 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn2bQ56A07 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.96■□□□□ 0.95
Scn2bQ56A07 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.96■□□□□ 0.95
Scn2bQ56A07 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn2bQ56A07 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn2bQ56A07 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Scn2bQ56A07 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Scn2bQ56A07 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn2bQ56A07 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Scn2bQ56A07 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.95■□□□□ 0.94
Scn2bQ56A07 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn2bQ56A07 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.95■□□□□ 0.94
Scn2bQ56A07 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn2bQ56A07 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn2bQ56A07 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn2bQ56A07 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn2bQ56A07 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Scn2bQ56A07 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scn2bQ56A07 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Scn2bQ56A07 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn2bQ56A07 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn2bQ56A07 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms