Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim80Q3V061 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim80Q3V061 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim80Q3V061 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Trim80Q3V061 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.76■■□□□ 1.07
Trim80Q3V061 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim80Q3V061 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim80Q3V061 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim80Q3V061 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim80Q3V061 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim80Q3V061 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim80Q3V061 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim80Q3V061 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.75■■□□□ 1.07
Trim80Q3V061 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim80Q3V061 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.75■■□□□ 1.07
Trim80Q3V061 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim80Q3V061 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim80Q3V061 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim80Q3V061 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.75■■□□□ 1.07
Trim80Q3V061 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim80Q3V061 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.75■■□□□ 1.07
Trim80Q3V061 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Trim80Q3V061 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim80Q3V061 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim80Q3V061 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim80Q3V061 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim80Q3V061 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim80Q3V061 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim80Q3V061 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim80Q3V061 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim80Q3V061 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim80Q3V061 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim80Q3V061 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.73■■□□□ 1.07
Trim80Q3V061 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim80Q3V061 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim80Q3V061 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim80Q3V061 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim80Q3V061 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trim80Q3V061 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim80Q3V061 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim80Q3V061 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim80Q3V061 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
Trim80Q3V061 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim80Q3V061 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim80Q3V061 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.71■■□□□ 1.07
Trim80Q3V061 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim80Q3V061 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim80Q3V061 Gm14523-201ENSMUST00000117260 558 ntBASIC21.71■■□□□ 1.07
Trim80Q3V061 Gm27502-201ENSMUST00000183495 199 ntBASIC21.71■■□□□ 1.07
Trim80Q3V061 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.71■■□□□ 1.07
Trim80Q3V061 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim80Q3V061 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim80Q3V061 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim80Q3V061 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim80Q3V061 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim80Q3V061 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim80Q3V061 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim80Q3V061 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim80Q3V061 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.69■■□□□ 1.06
Trim80Q3V061 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim80Q3V061 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.68■■□□□ 1.06
Trim80Q3V061 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim80Q3V061 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim80Q3V061 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim80Q3V061 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.68■■□□□ 1.06
Trim80Q3V061 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Trim80Q3V061 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim80Q3V061 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim80Q3V061 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim80Q3V061 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim80Q3V061 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim80Q3V061 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim80Q3V061 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim80Q3V061 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
Trim80Q3V061 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim80Q3V061 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim80Q3V061 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim80Q3V061 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trim80Q3V061 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim80Q3V061 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Trim80Q3V061 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.66■■□□□ 1.06
Trim80Q3V061 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trim80Q3V061 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim80Q3V061 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
Trim80Q3V061 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Trim80Q3V061 Iqck-206ENSMUST00000208658 2891 ntBASIC21.65■■□□□ 1.06
Trim80Q3V061 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Trim80Q3V061 Gm9812-201ENSMUST00000061934 968 ntBASIC21.65■■□□□ 1.06
Trim80Q3V061 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim80Q3V061 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim80Q3V061 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim80Q3V061 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.65■■□□□ 1.06
Trim80Q3V061 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim80Q3V061 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim80Q3V061 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trim80Q3V061 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim80Q3V061 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.64■■□□□ 1.05
Trim80Q3V061 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim80Q3V061 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim80Q3V061 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms