Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf223Q3UV31 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.85■□□□□ 0.93
Rnf223Q3UV31 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rnf223Q3UV31 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf223Q3UV31 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rnf223Q3UV31 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf223Q3UV31 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.84■□□□□ 0.93
Rnf223Q3UV31 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf223Q3UV31 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf223Q3UV31 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf223Q3UV31 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf223Q3UV31 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf223Q3UV31 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf223Q3UV31 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf223Q3UV31 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf223Q3UV31 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rnf223Q3UV31 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf223Q3UV31 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf223Q3UV31 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.82■□□□□ 0.92
Rnf223Q3UV31 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf223Q3UV31 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.81■□□□□ 0.92
Rnf223Q3UV31 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rnf223Q3UV31 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf223Q3UV31 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf223Q3UV31 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.81■□□□□ 0.92
Rnf223Q3UV31 Gm40881-201ENSMUST00000223397 166 ntBASIC20.81■□□□□ 0.92
Rnf223Q3UV31 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf223Q3UV31 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf223Q3UV31 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf223Q3UV31 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf223Q3UV31 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf223Q3UV31 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.8■□□□□ 0.92
Rnf223Q3UV31 Gm7417-201ENSMUST00000192950 473 ntBASIC20.8■□□□□ 0.92
Rnf223Q3UV31 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf223Q3UV31 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf223Q3UV31 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf223Q3UV31 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf223Q3UV31 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf223Q3UV31 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf223Q3UV31 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf223Q3UV31 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf223Q3UV31 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf223Q3UV31 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf223Q3UV31 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.79■□□□□ 0.92
Rnf223Q3UV31 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf223Q3UV31 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rnf223Q3UV31 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf223Q3UV31 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rnf223Q3UV31 Gm10399-202ENSMUST00000202768 748 ntBASIC20.78■□□□□ 0.92
Rnf223Q3UV31 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf223Q3UV31 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf223Q3UV31 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rnf223Q3UV31 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.77■□□□□ 0.92
Rnf223Q3UV31 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rnf223Q3UV31 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.77■□□□□ 0.91
Rnf223Q3UV31 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf223Q3UV31 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf223Q3UV31 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Rnf223Q3UV31 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.76■□□□□ 0.91
Rnf223Q3UV31 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf223Q3UV31 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf223Q3UV31 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf223Q3UV31 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf223Q3UV31 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf223Q3UV31 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.75■□□□□ 0.91
Rnf223Q3UV31 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.75■□□□□ 0.91
Rnf223Q3UV31 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf223Q3UV31 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf223Q3UV31 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.74■□□□□ 0.91
Rnf223Q3UV31 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf223Q3UV31 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf223Q3UV31 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf223Q3UV31 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf223Q3UV31 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf223Q3UV31 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf223Q3UV31 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf223Q3UV31 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf223Q3UV31 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rnf223Q3UV31 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.73■□□□□ 0.91
Rnf223Q3UV31 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf223Q3UV31 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf223Q3UV31 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf223Q3UV31 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.72■□□□□ 0.91
Rnf223Q3UV31 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf223Q3UV31 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf223Q3UV31 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.72■□□□□ 0.91
Rnf223Q3UV31 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf223Q3UV31 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf223Q3UV31 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.71■□□□□ 0.91
Rnf223Q3UV31 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
Rnf223Q3UV31 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf223Q3UV31 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf223Q3UV31 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf223Q3UV31 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf223Q3UV31 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.71■□□□□ 0.91
Rnf223Q3UV31 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf223Q3UV31 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rnf223Q3UV31 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.7■□□□□ 0.9
Rnf223Q3UV31 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rnf223Q3UV31 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms