Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxr1Q3UTB7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.84■■□□□ 1.09
Foxr1Q3UTB7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Foxr1Q3UTB7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Foxr1Q3UTB7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Foxr1Q3UTB7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.83■■□□□ 1.09
Foxr1Q3UTB7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.83■■□□□ 1.09
Foxr1Q3UTB7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Foxr1Q3UTB7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.83■■□□□ 1.09
Foxr1Q3UTB7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.83■■□□□ 1.09
Foxr1Q3UTB7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Foxr1Q3UTB7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Foxr1Q3UTB7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxr1Q3UTB7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxr1Q3UTB7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxr1Q3UTB7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxr1Q3UTB7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxr1Q3UTB7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxr1Q3UTB7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Foxr1Q3UTB7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxr1Q3UTB7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Foxr1Q3UTB7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Foxr1Q3UTB7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxr1Q3UTB7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.81■■□□□ 1.08
Foxr1Q3UTB7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxr1Q3UTB7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxr1Q3UTB7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxr1Q3UTB7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxr1Q3UTB7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxr1Q3UTB7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Foxr1Q3UTB7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.8■■□□□ 1.08
Foxr1Q3UTB7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxr1Q3UTB7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxr1Q3UTB7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxr1Q3UTB7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.8■■□□□ 1.08
Foxr1Q3UTB7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Foxr1Q3UTB7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxr1Q3UTB7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Foxr1Q3UTB7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Foxr1Q3UTB7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.79■■□□□ 1.08
Foxr1Q3UTB7 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.79■■□□□ 1.08
Foxr1Q3UTB7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxr1Q3UTB7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Foxr1Q3UTB7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxr1Q3UTB7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Foxr1Q3UTB7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxr1Q3UTB7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxr1Q3UTB7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Foxr1Q3UTB7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxr1Q3UTB7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Foxr1Q3UTB7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxr1Q3UTB7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.77■■□□□ 1.08
Foxr1Q3UTB7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Foxr1Q3UTB7 Gm22238-201ENSMUST00000175222 88 ntBASIC21.77■■□□□ 1.08
Foxr1Q3UTB7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.77■■□□□ 1.08
Foxr1Q3UTB7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Foxr1Q3UTB7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Foxr1Q3UTB7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Foxr1Q3UTB7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Foxr1Q3UTB7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Foxr1Q3UTB7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Foxr1Q3UTB7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Foxr1Q3UTB7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Foxr1Q3UTB7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Foxr1Q3UTB7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.75■■□□□ 1.07
Foxr1Q3UTB7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.75■■□□□ 1.07
Foxr1Q3UTB7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Foxr1Q3UTB7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxr1Q3UTB7 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.75■■□□□ 1.07
Foxr1Q3UTB7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Foxr1Q3UTB7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxr1Q3UTB7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Foxr1Q3UTB7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Foxr1Q3UTB7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Foxr1Q3UTB7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxr1Q3UTB7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxr1Q3UTB7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxr1Q3UTB7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxr1Q3UTB7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxr1Q3UTB7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxr1Q3UTB7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Foxr1Q3UTB7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxr1Q3UTB7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxr1Q3UTB7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxr1Q3UTB7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Foxr1Q3UTB7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Foxr1Q3UTB7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Foxr1Q3UTB7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Foxr1Q3UTB7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxr1Q3UTB7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxr1Q3UTB7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxr1Q3UTB7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxr1Q3UTB7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.71■■□□□ 1.07
Foxr1Q3UTB7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Foxr1Q3UTB7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxr1Q3UTB7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.7■■□□□ 1.06
Foxr1Q3UTB7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.7■■□□□ 1.06
Foxr1Q3UTB7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxr1Q3UTB7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Foxr1Q3UTB7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms