Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Smcr8Q3UMB5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Gm15039-201ENSMUST00000118914 875 ntBASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smcr8Q3UMB5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Smcr8Q3UMB5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Smcr8Q3UMB5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Smcr8Q3UMB5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Smcr8Q3UMB5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Smcr8Q3UMB5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Smcr8Q3UMB5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Smcr8Q3UMB5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.86■■□□□ 1.25
Smcr8Q3UMB5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Smcr8Q3UMB5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
Smcr8Q3UMB5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smcr8Q3UMB5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Smcr8Q3UMB5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Smcr8Q3UMB5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.84■■□□□ 1.25
Smcr8Q3UMB5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Smcr8Q3UMB5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.84■■□□□ 1.25
Smcr8Q3UMB5 Gm40881-201ENSMUST00000223397 166 ntBASIC22.84■■□□□ 1.25
Smcr8Q3UMB5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Smcr8Q3UMB5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smcr8Q3UMB5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smcr8Q3UMB5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smcr8Q3UMB5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Smcr8Q3UMB5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.83■■□□□ 1.25
Smcr8Q3UMB5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Smcr8Q3UMB5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Smcr8Q3UMB5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Smcr8Q3UMB5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Smcr8Q3UMB5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smcr8Q3UMB5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.81■■□□□ 1.24
Smcr8Q3UMB5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.81■■□□□ 1.24
Smcr8Q3UMB5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Smcr8Q3UMB5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Smcr8Q3UMB5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smcr8Q3UMB5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smcr8Q3UMB5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Smcr8Q3UMB5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smcr8Q3UMB5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Smcr8Q3UMB5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.79■■□□□ 1.24
Smcr8Q3UMB5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smcr8Q3UMB5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Smcr8Q3UMB5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smcr8Q3UMB5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smcr8Q3UMB5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smcr8Q3UMB5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.77■■□□□ 1.24
Smcr8Q3UMB5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smcr8Q3UMB5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Smcr8Q3UMB5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smcr8Q3UMB5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Smcr8Q3UMB5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.77■■□□□ 1.24
Smcr8Q3UMB5 Gm10399-202ENSMUST00000202768 748 ntBASIC22.77■■□□□ 1.24
Smcr8Q3UMB5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Smcr8Q3UMB5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smcr8Q3UMB5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
Smcr8Q3UMB5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.77■■□□□ 1.23
Smcr8Q3UMB5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.76■■□□□ 1.23
Smcr8Q3UMB5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smcr8Q3UMB5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smcr8Q3UMB5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smcr8Q3UMB5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.76■■□□□ 1.23
Smcr8Q3UMB5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 368.5 ms