Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd3Q0EEE2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Ptchd3Q0EEE2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd3Q0EEE2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ptchd3Q0EEE2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd3Q0EEE2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd3Q0EEE2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd3Q0EEE2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.45■□□□□ 0.86
Ptchd3Q0EEE2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ptchd3Q0EEE2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.45■□□□□ 0.86
Ptchd3Q0EEE2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd3Q0EEE2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptchd3Q0EEE2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Ptchd3Q0EEE2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd3Q0EEE2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd3Q0EEE2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd3Q0EEE2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ptchd3Q0EEE2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd3Q0EEE2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd3Q0EEE2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.44■□□□□ 0.86
Ptchd3Q0EEE2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ptchd3Q0EEE2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Gm11687-201ENSMUST00000118911 886 ntBASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptchd3Q0EEE2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd3Q0EEE2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd3Q0EEE2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd3Q0EEE2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd3Q0EEE2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.42■□□□□ 0.86
Ptchd3Q0EEE2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd3Q0EEE2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd3Q0EEE2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd3Q0EEE2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ptchd3Q0EEE2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ptchd3Q0EEE2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd3Q0EEE2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd3Q0EEE2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd3Q0EEE2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Ptchd3Q0EEE2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd3Q0EEE2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd3Q0EEE2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ptchd3Q0EEE2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ptchd3Q0EEE2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd3Q0EEE2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd3Q0EEE2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd3Q0EEE2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd3Q0EEE2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd3Q0EEE2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd3Q0EEE2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd3Q0EEE2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd3Q0EEE2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ptchd3Q0EEE2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ptchd3Q0EEE2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd3Q0EEE2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd3Q0EEE2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ptchd3Q0EEE2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd3Q0EEE2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd3Q0EEE2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
Ptchd3Q0EEE2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd3Q0EEE2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.37■□□□□ 0.85
Ptchd3Q0EEE2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd3Q0EEE2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.37■□□□□ 0.85
Ptchd3Q0EEE2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ptchd3Q0EEE2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd3Q0EEE2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd3Q0EEE2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ptchd3Q0EEE2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd3Q0EEE2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd3Q0EEE2 Gm11175-201ENSMUST00000116172 543 ntBASIC20.35■□□□□ 0.85
Ptchd3Q0EEE2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd3Q0EEE2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd3Q0EEE2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms