Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gbx1P82976 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.99■□□□□ 0.79
Gbx1P82976 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gbx1P82976 Gm14523-201ENSMUST00000117260 558 ntBASIC19.99■□□□□ 0.79
Gbx1P82976 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.99■□□□□ 0.79
Gbx1P82976 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gbx1P82976 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gbx1P82976 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gbx1P82976 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Gbx1P82976 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gbx1P82976 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gbx1P82976 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gbx1P82976 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Gbx1P82976 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gbx1P82976 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gbx1P82976 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gbx1P82976 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gbx1P82976 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Gbx1P82976 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gbx1P82976 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.98■□□□□ 0.79
Gbx1P82976 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gbx1P82976 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gbx1P82976 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gbx1P82976 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gbx1P82976 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Gbx1P82976 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.96■□□□□ 0.79
Gbx1P82976 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gbx1P82976 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gbx1P82976 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gbx1P82976 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gbx1P82976 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Gbx1P82976 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gbx1P82976 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gbx1P82976 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Gbx1P82976 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gbx1P82976 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gbx1P82976 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gbx1P82976 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gbx1P82976 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gbx1P82976 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gbx1P82976 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.95■□□□□ 0.78
Gbx1P82976 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gbx1P82976 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gbx1P82976 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.95■□□□□ 0.78
Gbx1P82976 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Gbx1P82976 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Gbx1P82976 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gbx1P82976 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.94■□□□□ 0.78
Gbx1P82976 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gbx1P82976 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gbx1P82976 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gbx1P82976 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gbx1P82976 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gbx1P82976 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.93■□□□□ 0.78
Gbx1P82976 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gbx1P82976 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gbx1P82976 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gbx1P82976 Gm7332-201ENSMUST00000118351 454 ntBASIC19.92■□□□□ 0.78
Gbx1P82976 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gbx1P82976 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Gbx1P82976 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gbx1P82976 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Gbx1P82976 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Gbx1P82976 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gbx1P82976 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.91■□□□□ 0.78
Gbx1P82976 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gbx1P82976 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gbx1P82976 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gbx1P82976 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gbx1P82976 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gbx1P82976 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gbx1P82976 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gbx1P82976 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gbx1P82976 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gbx1P82976 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Gbx1P82976 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gbx1P82976 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Gbx1P82976 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gbx1P82976 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gbx1P82976 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gbx1P82976 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gbx1P82976 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Gbx1P82976 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gbx1P82976 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gbx1P82976 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gbx1P82976 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.88■□□□□ 0.77
Gbx1P82976 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Gbx1P82976 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gbx1P82976 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Gbx1P82976 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gbx1P82976 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Gbx1P82976 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gbx1P82976 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.87■□□□□ 0.77
Gbx1P82976 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gbx1P82976 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gbx1P82976 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gbx1P82976 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.86■□□□□ 0.77
Gbx1P82976 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gbx1P82976 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Gbx1P82976 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms