Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx1P63006 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx1P63006 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx1P63006 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx1P63006 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx1P63006 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Lhx1P63006 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Lhx1P63006 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Lhx1P63006 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx1P63006 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.02■□□□□ 0.96
Lhx1P63006 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.02■□□□□ 0.96
Lhx1P63006 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.02■□□□□ 0.96
Lhx1P63006 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx1P63006 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx1P63006 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lhx1P63006 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx1P63006 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx1P63006 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.01■□□□□ 0.95
Lhx1P63006 Gm10399-202ENSMUST00000202768 748 ntBASIC21.01■□□□□ 0.95
Lhx1P63006 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx1P63006 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx1P63006 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21■□□□□ 0.95
Lhx1P63006 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lhx1P63006 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lhx1P63006 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx1P63006 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx1P63006 Etf1-202ENSMUST00000180351 108 ntBASIC20.99■□□□□ 0.95
Lhx1P63006 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.99■□□□□ 0.95
Lhx1P63006 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.99■□□□□ 0.95
Lhx1P63006 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Lhx1P63006 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx1P63006 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx1P63006 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx1P63006 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Lhx1P63006 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Lhx1P63006 Gm14117-201ENSMUST00000122417 843 ntBASIC20.98■□□□□ 0.95
Lhx1P63006 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx1P63006 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.98■□□□□ 0.95
Lhx1P63006 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx1P63006 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx1P63006 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.98■□□□□ 0.95
Lhx1P63006 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx1P63006 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Lhx1P63006 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx1P63006 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.97■□□□□ 0.95
Lhx1P63006 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx1P63006 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.97■□□□□ 0.95
Lhx1P63006 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx1P63006 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx1P63006 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx1P63006 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx1P63006 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx1P63006 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx1P63006 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx1P63006 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx1P63006 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx1P63006 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.95■□□□□ 0.94
Lhx1P63006 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.95■□□□□ 0.94
Lhx1P63006 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx1P63006 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Lhx1P63006 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx1P63006 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx1P63006 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Lhx1P63006 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Lhx1P63006 Gm7417-201ENSMUST00000192950 473 ntBASIC20.94■□□□□ 0.94
Lhx1P63006 Gm40881-201ENSMUST00000223397 166 ntBASIC20.94■□□□□ 0.94
Lhx1P63006 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.93■□□□□ 0.94
Lhx1P63006 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.93■□□□□ 0.94
Lhx1P63006 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx1P63006 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx1P63006 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx1P63006 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.92■□□□□ 0.94
Lhx1P63006 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx1P63006 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx1P63006 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.92■□□□□ 0.94
Lhx1P63006 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx1P63006 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx1P63006 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.9■□□□□ 0.94
Lhx1P63006 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Lhx1P63006 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx1P63006 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Lhx1P63006 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx1P63006 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Lhx1P63006 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx1P63006 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx1P63006 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx1P63006 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Lhx1P63006 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx1P63006 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.89■□□□□ 0.93
Lhx1P63006 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx1P63006 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx1P63006 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx1P63006 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx1P63006 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx1P63006 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx1P63006 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx1P63006 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.88■□□□□ 0.93
Lhx1P63006 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Lhx1P63006 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Lhx1P63006 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms