Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1bP61025 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cks1bP61025 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cks1bP61025 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Cks1bP61025 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1bP61025 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1bP61025 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1bP61025 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cks1bP61025 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1bP61025 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cks1bP61025 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1bP61025 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1bP61025 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cks1bP61025 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cks1bP61025 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1bP61025 Gm37136-201ENSMUST00000194368 194 ntBASIC14.97□□□□□ -0.01
Cks1bP61025 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1bP61025 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1bP61025 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1bP61025 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1bP61025 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cks1bP61025 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1bP61025 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cks1bP61025 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1bP61025 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1bP61025 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.96□□□□□ -0.01
Cks1bP61025 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1bP61025 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cks1bP61025 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.96□□□□□ -0.02
Cks1bP61025 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Cks1bP61025 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1bP61025 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cks1bP61025 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.95□□□□□ -0.02
Cks1bP61025 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Cks1bP61025 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1bP61025 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1bP61025 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cks1bP61025 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1bP61025 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cks1bP61025 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1bP61025 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1bP61025 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1bP61025 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.94□□□□□ -0.02
Cks1bP61025 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1bP61025 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Cks1bP61025 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cks1bP61025 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1bP61025 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cks1bP61025 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1bP61025 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1bP61025 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1bP61025 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1bP61025 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1bP61025 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1bP61025 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1bP61025 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1bP61025 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cks1bP61025 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cks1bP61025 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cks1bP61025 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cks1bP61025 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1bP61025 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cks1bP61025 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.91□□□□□ -0.02
Cks1bP61025 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1bP61025 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cks1bP61025 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cks1bP61025 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1bP61025 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1bP61025 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.9□□□□□ -0.02
Cks1bP61025 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1bP61025 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1bP61025 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cks1bP61025 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Cks1bP61025 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1bP61025 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1bP61025 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1bP61025 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1bP61025 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cks1bP61025 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.89□□□□□ -0.03
Cks1bP61025 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1bP61025 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1bP61025 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1bP61025 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1bP61025 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1bP61025 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1bP61025 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cks1bP61025 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.89□□□□□ -0.03
Cks1bP61025 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cks1bP61025 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cks1bP61025 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms