Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tpm1P58771 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tpm1P58771 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tpm1P58771 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tpm1P58771 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.66■■□□□ 1.38
Tpm1P58771 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tpm1P58771 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Tpm1P58771 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
Tpm1P58771 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
Tpm1P58771 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tpm1P58771 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tpm1P58771 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tpm1P58771 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tpm1P58771 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tpm1P58771 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Tpm1P58771 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tpm1P58771 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.65■■□□□ 1.38
Tpm1P58771 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tpm1P58771 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Tpm1P58771 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Tpm1P58771 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Tpm1P58771 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tpm1P58771 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tpm1P58771 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Tpm1P58771 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tpm1P58771 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tpm1P58771 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Tpm1P58771 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Tpm1P58771 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Tpm1P58771 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.63■■□□□ 1.37
Tpm1P58771 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tpm1P58771 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tpm1P58771 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tpm1P58771 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Tpm1P58771 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.62■■□□□ 1.37
Tpm1P58771 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tpm1P58771 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
Tpm1P58771 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.62■■□□□ 1.37
Tpm1P58771 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tpm1P58771 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tpm1P58771 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tpm1P58771 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tpm1P58771 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Tpm1P58771 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tpm1P58771 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Tpm1P58771 Gm7432-201ENSMUST00000210343 879 ntBASIC23.61■■□□□ 1.37
Tpm1P58771 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Tpm1P58771 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tpm1P58771 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tpm1P58771 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tpm1P58771 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Tpm1P58771 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Tpm1P58771 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tpm1P58771 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.6■■□□□ 1.37
Tpm1P58771 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Tpm1P58771 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tpm1P58771 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tpm1P58771 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.59■■□□□ 1.37
Tpm1P58771 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Tpm1P58771 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tpm1P58771 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tpm1P58771 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Tpm1P58771 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Tpm1P58771 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Tpm1P58771 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tpm1P58771 Gm11599-201ENSMUST00000118720 878 ntBASIC23.56■■□□□ 1.36
Tpm1P58771 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Tpm1P58771 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.56■■□□□ 1.36
Tpm1P58771 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tpm1P58771 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tpm1P58771 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tpm1P58771 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tpm1P58771 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Tpm1P58771 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tpm1P58771 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Tpm1P58771 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Tpm1P58771 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Tpm1P58771 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tpm1P58771 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tpm1P58771 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tpm1P58771 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tpm1P58771 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Tpm1P58771 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Tpm1P58771 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tpm1P58771 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
Tpm1P58771 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tpm1P58771 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Tpm1P58771 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.54■■□□□ 1.36
Tpm1P58771 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Tpm1P58771 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tpm1P58771 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tpm1P58771 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.54■■□□□ 1.36
Tpm1P58771 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tpm1P58771 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tpm1P58771 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tpm1P58771 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tpm1P58771 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.53■■□□□ 1.36
Tpm1P58771 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.53■■□□□ 1.36
Tpm1P58771 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.53■■□□□ 1.36
Tpm1P58771 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms