Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.6■□□□□ 0.41
Nkx2-1P50220 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-1P50220 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-1P50220 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-1P50220 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-1P50220 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-1P50220 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-1P50220 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nkx2-1P50220 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-1P50220 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nkx2-1P50220 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nkx2-1P50220 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.58■□□□□ 0.4
Nkx2-1P50220 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-1P50220 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-1P50220 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nkx2-1P50220 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-1P50220 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.58■□□□□ 0.4
Nkx2-1P50220 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-1P50220 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-1P50220 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-1P50220 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-1P50220 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.55■□□□□ 0.4
Nkx2-1P50220 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-1P50220 Gm4799-201ENSMUST00000095396 657 ntBASIC17.55■□□□□ 0.4
Nkx2-1P50220 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-1P50220 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-1P50220 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-1P50220 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-1P50220 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-1P50220 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nkx2-1P50220 Gm11599-201ENSMUST00000118720 878 ntBASIC17.54■□□□□ 0.4
Nkx2-1P50220 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-1P50220 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-1P50220 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nkx2-1P50220 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-1P50220 Gm9812-201ENSMUST00000061934 968 ntBASIC17.53■□□□□ 0.4
Nkx2-1P50220 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-1P50220 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.52■□□□□ 0.4
Nkx2-1P50220 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-1P50220 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-1P50220 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nkx2-1P50220 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.52■□□□□ 0.39
Nkx2-1P50220 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-1P50220 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-1P50220 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-1P50220 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.51■□□□□ 0.39
Nkx2-1P50220 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Nkx2-1P50220 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nkx2-1P50220 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.5■□□□□ 0.39
Nkx2-1P50220 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-1P50220 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.5■□□□□ 0.39
Nkx2-1P50220 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-1P50220 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-1P50220 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-1P50220 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-1P50220 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-1P50220 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-1P50220 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-1P50220 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nkx2-1P50220 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-1P50220 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nkx2-1P50220 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-1P50220 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-1P50220 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-1P50220 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Nkx2-1P50220 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-1P50220 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-1P50220 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-1P50220 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-1P50220 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-1P50220 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-1P50220 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-1P50220 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms